RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 RXFP3Q9NSD7 469 aa13.64□□□□□ -0.23
COL1A1-208ENST00000494334 PHTF1Q9UMS5 762 aa13.64□□□□□ -0.23
COL1A1-208ENST00000494334 R3HDM2Q9Y2K5 976 aaKnown RBP13.64□□□□□ -0.23
COL1A1-208ENST00000494334 JRKLQ9Y4A0 524 aa13.64□□□□□ -0.23
COL1A1-208ENST00000494334 PTPRZ1P23471 2315 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-208ENST00000494334 CEP192Q8TEP8 1941 aa13.64□□□□□ -0.23
COL1A1-208ENST00000494334 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
COL1A1-208ENST00000494334 FAM186AA6NE01 2351 aa13.64□□□□□ -0.23
COL1A1-208ENST00000494334 IGLON5A6NGN9 336 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 SLC31A1O15431 190 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 FOXD2O60548 495 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 MMP20O60882 483 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 PAK4O96013 591 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 CPP00450 1065 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 PRLP01236 227 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 PRLRP16471 622 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 NUDT1P36639 197 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 CD86P42081 329 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 CSNK1EP49674 416 aaKnown RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 AFF3P51826 1226 aaKnown RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 FAM193AP78312 1265 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 SEMG2Q02383 582 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 SETMARQ53H47 684 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 NAPEPLDQ6IQ20 393 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 DARS2Q6PI48 645 aaKnown RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 PID1Q7Z2X4 250 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 ZSCAN30Q86W11 494 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 CDKL3Q8IVW4 592 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 ZNF567Q8N184 647 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 SLC35F6Q8N357 371 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 CXorf40AQ8TE69 158 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 TADA1Q96BN2 335 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 IMP4Q96G21 291 aaKnown RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 SERAC1Q96JX3 654 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 RBM15Q96T37 977 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 C1QTNF2Q9BXJ5 285 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 SLC25A51Q9H1U9 297 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 KLHL8Q9P2G9 620 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 DMTF1Q9Y222 760 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 CHKBQ9Y259 395 aa13.63□□□□□ -0.23
COL1A1-208ENST00000494334 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL1A1-208ENST00000494334 A0A1B0GVT2 93 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 A0A1W2PR77 199 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 LNP1A1A4G5 178 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 PRAMEF26H0Y7S4 382 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 KIF5CO60282 957 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 GDF9O60383 454 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 WNT1P04628 370 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 ENGP17813 658 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 CXCR5P32302 372 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 MMP12P39900 470 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 GRIA4P48058 902 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 RALGDSQ12967 914 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 AASDHQ4L235 1098 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-208ENST00000494334 LAYNQ6UX15 382 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 TMEM145Q8NBT3 493 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 SPATA22Q8NHS9 363 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 SLC35B2Q8TB61 432 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 ASB12Q8WXK4 309 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 SCRN2Q96FV2 425 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 WRAP53Q9BUR4 548 aaKnown RBP13.62□□□□□ -0.23
COL1A1-208ENST00000494334 USP29Q9HBJ7 922 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 PCDH9Q9HC56 1237 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 FZD3Q9NPG1 666 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 AASDHPPTQ9NRN7 309 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 B4GALT6Q9UBX8 382 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 CA5BQ9Y2D0 317 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 PPIL1Q9Y3C6 166 aa13.62□□□□□ -0.23
COL1A1-208ENST00000494334 CFAP69A5D8W1 941 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 A8MX80 341 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 ARHGAP33O14559 1287 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 RAD51BO15315 384 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 KCNN4O15554 427 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 CEP104O60308 925 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 TM7SF2O76062 418 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 MT-CYBP00156 380 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-208ENST00000494334 ATP1A1P05023 1023 aaKnown RBP13.61□□□□□ -0.23
COL1A1-208ENST00000494334 NFKB1P19838 968 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 HNRNPA2B1P22626 353 aaKnown RBP13.61□□□□□ -0.23
COL1A1-208ENST00000494334 CD38P28907 300 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 LIG3P49916 1009 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 BNC1Q01954 994 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 SGCGQ13326 291 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 STAT4Q14765 748 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 PTPRRQ15256 657 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 SIX1Q15475 284 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-208ENST00000494334 TEAD4Q15561 434 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 LIPIQ6XZB0 460 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 DPPA4Q7L190 304 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 ADAT2Q7Z6V5 191 aaKnown RBP13.61□□□□□ -0.23
COL1A1-208ENST00000494334 LENG8Q96PV6 779 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-208ENST00000494334 SMIM14Q96QK8 99 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 FCRL5Q96RD9 977 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 MCCC1Q96RQ3 725 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-208ENST00000494334 KLF6Q99612 283 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-208ENST00000494334 MYOCQ99972 504 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 FERMT1Q9BQL6 677 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 TRHDEQ9UKU6 1024 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 DNPEPQ9ULA0 475 aa13.61□□□□□ -0.23
COL1A1-208ENST00000494334 COQ6Q9Y2Z9 468 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms