RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TMEM109Q9BVC6 243 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 HMG20AQ9NP66 347 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 KIF1AQ12756 1690 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 PTP4A2Q12974 167 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 KRT77Q7Z794 578 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 TNS4Q8IZW8 715 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 CORO1BQ9BR76 489 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 TTYH3Q9C0H2 523 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 FBXO5Q9UKT4 447 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 COG5Q9UP83 839 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 ANGPT4Q9Y264 503 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 HIST1H2ABP04908 130 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 PSMD5Q16401 504 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 LACTB2Q53H82 288 aaPredicted RBP19.25■□□□□ 0.67
COL27A1-207ENST00000494090 HIST3H2AQ7L7L0 130 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 HIST1H2ACQ93077 130 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 RCN3Q96D15 328 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 MTFMTQ96DP5 389 aaKnown RBP19.25■□□□□ 0.67
COL27A1-207ENST00000494090 MECRQ9BV79 373 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 R3HDM2Q9Y2K5 976 aaKnown RBP19.25■□□□□ 0.67
COL27A1-207ENST00000494090 LYPLA1O75608 230 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-207ENST00000494090 FGF1P05230 155 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 ITGA2P17301 1181 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 GSSP48637 474 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 SLC25A52Q3SY17 297 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 PTPN20Q4JDL3 420 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 STRADAQ7RTN6 431 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 P2RY11Q96G91 374 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 S100A13Q99584 98 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 ZMYND8Q9ULU4 1186 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-207ENST00000494090 TPSB2P20231 275 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 LPOP22079 712 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-207ENST00000494090 TM4SF1P30408 202 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 CRHR1P34998 444 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 CCR4P51679 360 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 PFKPQ01813 784 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 SULT2A1Q06520 285 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 TPSAB1Q15661 275 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 ABRAXAS1Q6UWZ7 409 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 MON1BQ7L1V2 547 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 SEMA3CQ99985 751 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 SLC4A5Q9BY07 1137 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 ST6GALNAC4Q9H4F1 302 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 PLLPQ9Y342 182 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 ASNA1O43681 348 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 SNAP91O60641 907 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 EPHA3P29320 983 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 TAF5Q15542 800 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 SPANXN2Q5MJ10 180 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 OR52L1Q8NGH7 329 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 IKZF4Q9H2S9 585 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 ULK1O75385 1050 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 SLURP2P0DP57 97 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 ZNF618Q5T7W0 954 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 DENND1CQ8IV53 801 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 RTKNQ9BST9 563 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 SOHLH2Q9NX45 425 aa19.24■□□□□ 0.67
COL27A1-207ENST00000494090 ERN1O75460 977 aaKnown RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 HGFP14210 728 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 HOXB6P17509 224 aaKnown RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 ZDHHC20Q5W0Z9 365 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 HTATIP2Q9BUP3 242 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 OXCT2Q9BYC2 517 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 ST3GAL5Q9UNP4 418 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 BUD23O43709 281 aaKnown RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 SHOX2O60902 331 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 OTCP00480 354 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 C4BPAP04003 597 aaKnown RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 CDC42P60953 191 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 MAPKAPK3Q16644 382 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 BROXQ5VW32 411 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 ZNF549Q6P9A3 640 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 LCLAT1Q6UWP7 414 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 R3HCC1LQ7Z5L2 792 aaKnown RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 XYLT1Q86Y38 959 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 CD101Q93033 1021 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 NKD2Q969F2 451 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 NBNO60934 754 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 TGDSO95455 350 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 MON1AQ86VX9 555 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 DNAJB14Q8TBM8 379 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 LRRN4Q8WUT4 740 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 TIFAQ96CG3 184 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 MRPL45Q9BRJ2 306 aaKnown RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 FANCEQ9HB96 536 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 RCOR3Q9P2K3 495 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 ACSL4O60488 711 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 RGS1Q08116 209 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 CTBP1Q13363 440 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 GPRIN3Q6ZVF9 776 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 C12orf50Q8NA57 414 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 SPPL2BQ8TCT7 592 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 GINS4Q9BRT9 223 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 OSBPL11Q9BXB4 747 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 DGCR6LQ9BY27 220 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 TRIM8Q9BZR9 551 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 REXO4Q9GZR2 422 aaKnown RBP19.23■□□□□ 0.67
COL27A1-207ENST00000494090 ARL8BQ9NVJ2 186 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 PNPOQ9NVS9 261 aa19.23■□□□□ 0.67
COL27A1-207ENST00000494090 GSTK1Q9Y2Q3 226 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms