RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SPECC1L-ADORA2AF8WAN1 911 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 C1QAP02745 245 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 PRKCGP05129 697 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 CTHP32929 405 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 GRIA4P48058 902 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 KBTBD12Q3ZCT8 623 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 NLRP9Q7RTR0 991 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 PAF1Q8N7H5 531 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 PIH1D2Q8WWB5 315 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 PTPRN2Q92932 1015 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 PKNOX2Q96KN3 472 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 ZNF778Q96MU6 729 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 ZNF641Q96N77 438 aaPredicted RBP21.01■□□□□ 0.95
SND1-214ENST00000489417 CENPHQ9H3R5 247 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 MTG2Q9H4K7 406 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 SUV39H2Q9H5I1 410 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 THAP10Q9P2Z0 257 aaPredicted RBP21.01■□□□□ 0.95
SND1-214ENST00000489417 SLC24A2Q9UI40 661 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 SPO11Q9Y5K1 396 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 MYLKQ15746 1914 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 SZT2Q5T011 3432 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 GOLGA8KD6RF30 607 aa21■□□□□ 0.95
SND1-214ENST00000489417 H3BQF6 201 aa21■□□□□ 0.95
SND1-214ENST00000489417 ASGR2P07307 311 aa21■□□□□ 0.95
SND1-214ENST00000489417 PIRTP0C851 137 aa21■□□□□ 0.95
SND1-214ENST00000489417 HNRNPA1L2Q32P51 320 aaKnown RBP21■□□□□ 0.95
SND1-214ENST00000489417 TSTD2Q5T7W7 516 aa21■□□□□ 0.95
SND1-214ENST00000489417 UNC5BQ8IZJ1 945 aa21■□□□□ 0.95
SND1-214ENST00000489417 ZNF366Q8N895 744 aa21■□□□□ 0.95
SND1-214ENST00000489417 BRSK1Q8TDC3 778 aa21■□□□□ 0.95
SND1-214ENST00000489417 ARL8AQ96BM9 186 aa21■□□□□ 0.95
SND1-214ENST00000489417 CERS2Q96G23 380 aa21■□□□□ 0.95
SND1-214ENST00000489417 C8orf33Q9H7E9 229 aaPredicted RBP21■□□□□ 0.95
SND1-214ENST00000489417 FBRSL1Q9HCM7 1045 aaKnown RBP21■□□□□ 0.95
SND1-214ENST00000489417 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21■□□□□ 0.952e-9■□□□□ 8.6
SND1-214ENST00000489417 VPS18Q9P253 973 aa21■□□□□ 0.95
SND1-214ENST00000489417 EDDM13A0A1B0GTR0 161 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 MROH6A6NGR9 719 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 LDB2O43679 373 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 PAPSS2O95340 614 aaPredicted RBP20.99■□□□□ 0.95
SND1-214ENST00000489417 UGT2B4P06133 528 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 GCAP28676 217 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 SLC8A1P32418 973 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 TNFRSF4P43489 277 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 MGAT5Q09328 741 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 ESRP1Q6NXG1 681 aaKnown RBP20.99■□□□□ 0.95
SND1-214ENST00000489417 ZNF449Q6P9G9 518 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 SERPINA13PQ6UXR4 307 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 GDPD4Q6W3E5 623 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 RALGPS2Q86X27 583 aaPredicted RBP20.99■□□□□ 0.95
SND1-214ENST00000489417 TDRPQ86YL5 185 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 CTAGE3PQ8IX95 158 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 RIBC1Q8N443 379 aaPredicted RBP20.99■□□□□ 0.95
SND1-214ENST00000489417 GRIN3AQ8TCU5 1115 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 ECHDC3Q96DC8 303 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 PAFAH2Q99487 392 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 TMEM245Q9H330 911 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 SMYD2Q9NRG4 433 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 TREX1Q9NSU2 369 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 HACD3Q9P035 362 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 IL36AQ9UHA7 158 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 HCN2Q9UL51 889 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 WASF2Q9Y6W5 498 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 PIAS3Q9Y6X2 628 aa20.99■□□□□ 0.95
SND1-214ENST00000489417 ANKRD36A6QL64 1941 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 A0A1W2PQ67 120 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 CXorf49A8MYA2 514 aaPredicted RBP20.98■□□□□ 0.95
SND1-214ENST00000489417 RGS16O15492 202 aaPredicted RBP20.98■□□□□ 0.95
SND1-214ENST00000489417 CDH16O75309 829 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 PIAS1O75925 651 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 CRTAMO95727 393 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 HLA-EP13747 358 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 PAMP19021 973 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 MSH2P43246 934 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 E2F5Q15329 346 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 AGBL2Q5U5Z8 902 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 EGFLAMQ63HQ2 1017 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 KIAA0930Q6ICG6 404 aaPredicted RBP20.98■□□□□ 0.95
SND1-214ENST00000489417 TXNDC11Q6PKC3 985 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 RASSF3Q86WH2 238 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 PPM1NQ8N819 430 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 CDKL2Q92772 493 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 MRRFQ96E11 262 aaKnown RBP20.98■□□□□ 0.95
SND1-214ENST00000489417 PGM2Q96G03 612 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 SMIM14Q96QK8 99 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 DHRS4Q9BTZ2 278 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 PPANQ9NQ55 473 aaKnown RBP20.98■□□□□ 0.95
SND1-214ENST00000489417 BCCIPQ9P287 314 aaKnown RBP eCLIP20.98■□□□□ 0.95
SND1-214ENST00000489417 SLC2A6Q9UGQ3 507 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 LGALS13Q9UHV8 139 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 STARD13Q9Y3M8 1113 aa20.98■□□□□ 0.95
SND1-214ENST00000489417 ERVK-10P10266 1014 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 HNRNPLP14866 589 aaKnown RBP eCLIP20.97■□□□□ 0.95
SND1-214ENST00000489417 IL9P15248 144 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 CTPS1P17812 591 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 ABL2P42684 1182 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 IL12RB1P42701 662 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 NAB1Q13506 487 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 RASA2Q15283 850 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 TAF1AQ15573 450 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms