RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 RPS26P62854 115 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 MPP3Q13368 585 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 HNRNPDQ14103 355 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 MPP2Q14168 576 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 USP41Q3LFD5 358 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 RNF187Q5TA31 235 aaPredicted RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 KCTD11Q693B1 232 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 SLC8B1Q6J4K2 584 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 CASC4Q6P4E1 433 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 FUT10Q6P4F1 479 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 SH2D5Q6ZV89 423 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 TRPM8Q7Z2W7 1104 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 TMEM135Q86UB9 458 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 C1QL4Q86Z23 238 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 HID1Q8IV36 788 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 IGDCC3Q8IVU1 814 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 SCN4BQ8IWT1 228 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 CTAGE3PQ8IX95 158 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 LMNTD2Q8IXW0 634 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ATPAF2Q8N5M1 289 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 PPM1NQ8N819 430 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 STKLD1Q8NE28 680 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 DBF4BQ8NFT6 615 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ZNF296Q8WUU4 475 aaPredicted RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 DEPDC1BQ8WUY9 529 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 LINC01599Q8WXQ3 324 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 CCT6BQ92526 530 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 NDRG1Q92597 394 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ZNF75CPQ92670 426 aaPredicted RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 DPF3Q92784 378 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 FCRL2Q96LA5 508 aaPredicted RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ELAC2Q9BQ52 826 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 WDR83Q9BRX9 315 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 MAGEB5Q9BZ81 275 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ZYG11BQ9C0D3 744 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 SLC25A51Q9H1U9 297 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 RXFP1Q9HBX9 757 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ARNT2Q9HBZ2 717 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 TMEM30AQ9NV96 361 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 TMEM248Q9NWD8 314 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 COX16Q9P0S2 106 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 PRKAG3Q9UGI9 489 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 VANGL2Q9ULK5 521 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 SSX2IPQ9Y2D8 614 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 USH1CQ9Y6N9 552 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 PATJQ8NI35 1801 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 A0A1W2PQH9 124 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 TRIM49D1C9J1S8 452 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 FAM72CH0Y354 149 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 EDF1O60869 148 aaKnown RBP6.72□□□□□ -1.33
PDCD4-209ENST00000489049 NBNO60934 754 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 DNAJC8O75937 253 aaPredicted RBP6.72□□□□□ -1.33
PDCD4-209ENST00000489049 NEBLO76041 1014 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 PAPSS2O95340 614 aaPredicted RBP6.72□□□□□ -1.33
PDCD4-209ENST00000489049 LATS1O95835 1130 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 EFEMP2O95967 443 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 C1RP00736 705 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 EPOP01588 193 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 JCHAINP01591 159 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 IGLV3-27P01718 113 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 GALTP07902 379 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 COL6A2P12110 1019 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 PFKLP17858 780 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 PAMP19021 973 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 GRK2P25098 689 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 PSMB4P28070 264 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 SLC11A1P49279 550 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 PITX1P78337 314 aaPredicted RBP6.72□□□□□ -1.33
PDCD4-209ENST00000489049 GAD2Q05329 585 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 ACTN3Q08043 901 aaPredicted RBP6.72□□□□□ -1.33
PDCD4-209ENST00000489049 NIPAL4Q0D2K0 466 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 RFTN1Q14699 578 aaPredicted RBP6.72□□□□□ -1.33
PDCD4-209ENST00000489049 CRYMQ14894 314 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 C5orf22Q49AR2 442 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 PCID2Q5JVF3 399 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 UBAP2Q5T6F2 1119 aaKnown RBP6.72□□□□□ -1.33
PDCD4-209ENST00000489049 FAM72AQ5TYM5 149 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 PRAMEF13Q5VWM6 474 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 PDPK2PQ6A1A2 396 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 FAM72DQ6L9T8 149 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 RWDD4Q6NW29 188 aaKnown RBP6.72□□□□□ -1.33
PDCD4-209ENST00000489049 CNKSR3Q6P9H4 555 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 LVRNQ6Q4G3 990 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 KIAA0408Q6ZU52 694 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 ZNF534Q76KX8 674 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 RTL10Q7L3V2 364 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 GALNT7Q86SF2 657 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 FAM72BQ86X60 149 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 KIRREL3Q8IZU9 778 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 BBS5Q8N3I7 341 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 DNAAF3Q8N9W5 541 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 SCAMP5Q8TAC9 235 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 CALML6Q8TD86 181 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 MGARPQ8TDB4 240 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 SH3TC2Q8TF17 1288 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 FBXO32Q969P5 355 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 ZBTB9Q96C00 473 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 CCDC120Q96HB5 630 aa6.72□□□□□ -1.33
PDCD4-209ENST00000489049 COX4I2Q96KJ9 171 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms