RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 AHSGP02765 367 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 PIRTP0C851 137 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 CRHR1P34998 444 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 VIPR2P41587 438 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 MAPK8P45983 427 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 STK19P49842 368 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 SERPINB8P50452 374 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 PDE1CQ14123 709 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 DHCR24Q15392 516 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 PDK4Q16654 411 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 UGP2Q16851 508 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 EML3Q32P44 896 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 DGKKQ5KSL6 1271 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF470Q6ECI4 717 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 NEPROQ6NW34 567 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 SYCE2Q6PIF2 218 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 KIAA0408Q6ZU52 694 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 MICALCLQ6ZW33 695 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 GALNT7Q86SF2 657 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ADIPOR2Q86V24 386 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 DENND6AQ8IWF6 608 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 LRRC34Q8IZ02 419 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TDHQ8IZJ6 230 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 NDUFAF2Q8N183 169 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 LPCAT1Q8NF37 534 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF473Q8WTR7 871 aaKnown RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 OSCP1Q8WVF1 389 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 SMARCD2Q92925 531 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 PTPRN2Q92932 1015 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TIFAQ96CG3 184 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 RMDN1Q96DB5 314 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ASIC4Q96FT7 647 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ADGRE3Q9BY15 652 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TM6SF2Q9BZW4 377 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 MFSD1Q9H3U5 465 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 NSUN3Q9H649 340 aaKnown RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TRPV4Q9HBA0 871 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 SNX15Q9NRS6 342 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 CDH22Q9UJ99 828 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 MTO1Q9Y2Z2 717 aaKnown RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 PLLPQ9Y342 182 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TRAFD1O14545 582 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 NDUFAB1O14561 156 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 HOXC11O43248 304 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 HTRA2O43464 458 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 IGSF6O95976 241 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TAC1P20366 129 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 FCARP24071 287 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ABCG1P45844 678 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 MPP1Q00013 466 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 PDE1BQ01064 536 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 SULT2A1Q06520 285 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 CTBP1Q13363 440 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 THOC5Q13769 683 aaKnown RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TAF1AQ15573 450 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 QPCTQ16769 361 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TCEAL5Q5H9L2 206 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 HHATQ5VTY9 493 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TMEM215Q68D42 235 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ANKRD54Q6NXT1 300 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 C22orf39Q6P5X5 142 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF771Q7L3S4 317 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TAX1BP1Q86VP1 789 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 LMNTD2Q8IXW0 634 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 ACVR1CQ8NER5 493 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 MDGA1Q8NFP4 955 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 OR2AP1Q8NGE2 309 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 CALML6Q8TD86 181 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 STYXQ8WUJ0 223 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 SPOCK2Q92563 424 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 MYO19Q96H55 970 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 DNAJC1Q96KC8 554 aaKnown RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 RPL10LQ96L21 214 aaKnown RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 FAM111AQ96PZ2 611 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 CEP44Q9C0F1 390 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 IGFLR1Q9H665 355 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 NLE1Q9NVX2 485 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 DUS2Q9NX74 493 aaKnown RBP9.49□□□□□ -0.89
SF3B1-211ENST00000487698 OBP2AQ9NY56 170 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 GDE1Q9NZC3 331 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 FBXO5Q9UKT4 447 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 TNRC18O15417 2968 aaPredicted RBP9.48□□□□□ -0.89
SF3B1-211ENST00000487698 CCL22O00626 93 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 AURKAO14965 403 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 SOCS5O75159 536 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 RPP40O75818 363 aaKnown RBP9.48□□□□□ -0.89
SF3B1-211ENST00000487698 PGLSO95336 258 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 CRTAMO95727 393 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 GSRP00390 522 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 HADHAP40939 763 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 GRIA4P48058 902 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 CCT5P48643 541 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 RPL26P61254 145 aaKnown RBP9.48□□□□□ -0.89
SF3B1-211ENST00000487698 PTPRCAPQ14761 206 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 GRM3Q14832 879 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 GET4Q7L5D6 327 aaPredicted RBP9.48□□□□□ -0.89
SF3B1-211ENST00000487698 CMC1Q7Z7K0 106 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 CLEC14AQ86T13 490 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 CAMK1DQ8IU85 385 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms