RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 NPC1L1Q9UHC9 1359 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 PLEKHH1Q9ULM0 1364 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 A0A096LPK6 155 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 MDM4O15151 490 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 RTN3O95197 1032 aaPredicted RBP6.32□□□□□ -1.4
RTN4-214ENST00000486085 IFNA2P01563 188 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 TMEM191BP0C7N4 346 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 FMO4P31512 558 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 AVPR1AP37288 418 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 HARS2P49590 506 aaKnown RBP6.32□□□□□ -1.4
RTN4-214ENST00000486085 PLCD1P51178 756 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 SRSF1Q07955 248 aaKnown RBP eCLIP6.32□□□□□ -1.46e-8■■□□□ 14
RTN4-214ENST00000486085 FAAH2Q6GMR7 532 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 C11orf87Q6NUJ2 197 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 FAM83HQ6ZRV2 1179 aaPredicted RBP6.32□□□□□ -1.4
RTN4-214ENST00000486085 SLC16A12Q6ZSM3 486 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 GPAT4Q86UL3 456 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 TMC8Q8IU68 726 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 LURAP1LQ8IV03 231 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 WDR77Q9BQA1 342 aaPredicted RBP6.32□□□□□ -1.4
RTN4-214ENST00000486085 POLDIP3Q9BY77 421 aaKnown RBP6.32□□□□□ -1.4
RTN4-214ENST00000486085 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 LHPPQ9H008 270 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 PDCL3Q9H2J4 239 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 ZHX3Q9H4I2 956 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 PCDHB16Q9NRJ7 776 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 PNMA2Q9UL42 364 aa6.32□□□□□ -1.4
RTN4-214ENST00000486085 POLR3AO14802 1390 aaPredicted RBP6.31□□□□□ -1.4
RTN4-214ENST00000486085 DISP3Q9P2K9 1392 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 KIF1AQ12756 1690 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 LY6G6EA0A0G2JKS1 128 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 MOSPD3O75425 235 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 SYF2O95926 243 aaKnown RBP6.31□□□□□ -1.4
RTN4-214ENST00000486085 SLC2A4P14672 509 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 EPHA8P29322 1005 aaPredicted RBP6.31□□□□□ -1.4
RTN4-214ENST00000486085 GPR12P47775 334 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 PPP3CCP48454 512 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 YWHAZP63104 245 aaKnown RBP6.31□□□□□ -1.4
RTN4-214ENST00000486085 PTGR1Q14914 329 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 TAF11Q15544 211 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 TSTQ16762 297 aaKnown RBP6.31□□□□□ -1.4
RTN4-214ENST00000486085 EPHA10Q5JZY3 1008 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 Q5PR19 223 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 WASHC2DQ5SRD0 308 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 SERTAD4-AS1Q5TG53 156 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 HEPHL1Q6MZM0 1159 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 FAM180BQ6P0A1 224 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 ATF7IPQ6VMQ6 1270 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 TRAPPC11Q7Z392 1133 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 CADM3Q8N126 398 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 C11orf65Q8NCR3 313 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 ENGASEQ8NFI3 743 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 KCNG4Q8TDN1 519 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 TMEM170AQ8WVE7 144 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 UCMAQ8WVF2 138 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 INPP5DQ92835 1189 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 SKA1Q96BD8 255 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 NLRP4Q96MN2 994 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 NUF2Q9BZD4 464 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 ISCUQ9H1K1 167 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 C20orf141Q9NUB4 165 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 POT1Q9NUX5 634 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 HSPB7Q9UBY9 170 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 AASSQ9UDR5 926 aa6.31□□□□□ -1.4
RTN4-214ENST00000486085 CPSF1Q10570 1443 aaKnown RBP6.31□□□□□ -1.4
RTN4-214ENST00000486085 USP54Q70EL1 1684 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 TYW5A2RUC4 315 aaKnown RBP6.3□□□□□ -1.4
RTN4-214ENST00000486085 SOCS2O14508 198 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 KLKB1P03952 638 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 UBL4AP11441 157 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 ENO3P13929 434 aaPredicted RBP6.3□□□□□ -1.4
RTN4-214ENST00000486085 CHRNB2P17787 502 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 POU1F1P28069 291 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 CCR9P51686 369 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 NEXNQ0ZGT2 675 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 RUNX2Q13950 521 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 VEPH1Q14D04 833 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 PRTGQ2VWP7 1150 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 COLCA1Q6ZS62 124 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 LPAR1Q92633 364 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 HDAC2Q92769 488 aaKnown RBP6.3□□□□□ -1.4
RTN4-214ENST00000486085 KLHL29Q96CT2 875 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 ZBTB40Q9NUA8 1239 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 MPP6Q9NZW5 540 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 RNF7Q9UBF6 113 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 SSH2Q76I76 1423 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 MSH6P52701 1360 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 ANKRD36BQ8N2N9 1353 aa6.3□□□□□ -1.4
RTN4-214ENST00000486085 KIF7Q2M1P5 1343 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 ZNF521Q96K83 1311 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 CD163L1Q9NR16 1453 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 GAGE12JA6NER3 117 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 H0YGN5 161 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 TNFSF14O43557 240 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 CLDN7O95471 211 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 FGF2P09038 288 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 MYZAPP0CAP1 466 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms