RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 TAF1BQ53T94 588 aaPredicted RBP16.81■□□□□ 0.28
CTSA-207ENST00000484855 PTAR1Q7Z6K3 402 aaPredicted RBP16.81■□□□□ 0.28
CTSA-207ENST00000484855 E2F7Q96AV8 911 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 THOC1Q96FV9 657 aaKnown RBP16.81■□□□□ 0.28
CTSA-207ENST00000484855 DNAJC1Q96KC8 554 aaKnown RBP16.81■□□□□ 0.28
CTSA-207ENST00000484855 TMEM216Q9P0N5 145 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 KLHL14Q9P2G3 628 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 BUD23O43709 281 aaKnown RBP16.8■□□□□ 0.28
CTSA-207ENST00000484855 PRAMEF12O95522 483 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 CRTAMO95727 393 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 PROCP04070 461 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 PDHA1P08559 390 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 ERVK-21P61565 698 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 TRAF2Q12933 501 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 CHI3L2Q15782 390 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 DBN1Q16643 649 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 PLEKHG6Q3KR16 790 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 CCDC153Q494R4 210 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 RALGPS1Q5JS13 557 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 ATXN7L2Q5T6C5 722 aaPredicted RBP16.8■□□□□ 0.28
CTSA-207ENST00000484855 ATG16L1Q676U5 607 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 GLT6D1Q7Z4J2 308 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 CLEC14AQ86T13 490 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 PLD6Q8N2A8 252 aaKnown RBP16.8■□□□□ 0.28
CTSA-207ENST00000484855 OR13C4Q8NGS5 318 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 RAB3IL1Q8TBN0 382 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 STYXQ8WUJ0 223 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 PDCD6IPQ8WUM4 868 aaKnown RBP16.8■□□□□ 0.28
CTSA-207ENST00000484855 ELMO2Q96JJ3 720 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 ADGRE3Q9BY15 652 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 ZNF358Q9NW07 568 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 TLK1Q9UKI8 766 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 RIMKLBQ9ULI2 386 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 ANKRD6Q9Y2G4 727 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 SPO11Q9Y5K1 396 aa16.8■□□□□ 0.28
CTSA-207ENST00000484855 CCT8L1PA6NM43 557 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 ANKRD65E5RJM6 399 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 K7ERQ8 282 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 RPP40O75818 363 aaKnown RBP16.79■□□□□ 0.28
CTSA-207ENST00000484855 HAUS5O94927 633 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 CSRP3P50461 194 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 FASTKD1Q53R41 847 aaKnown RBP16.79■□□□□ 0.28
CTSA-207ENST00000484855 ELMSAN1Q6PJG2 1045 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 CILP2Q8IUL8 1156 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 LMNTD2Q8IXW0 634 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 GPATCH11Q8N954 259 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 TBATAQ96M53 351 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 TM6SF2Q9BZW4 377 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 PDE4DIPQ5VU43 2346 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 OR51F1A6NGY5 319 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 AURKAO14965 403 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 PHGDHO43175 533 aaKnown RBP16.79■□□□□ 0.28
CTSA-207ENST00000484855 TROVE2P10155 538 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTSA-207ENST00000484855 LEPRP48357 1165 aaKnown RBP16.79■□□□□ 0.28
CTSA-207ENST00000484855 PTPRCAPQ14761 206 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 SHHQ15465 462 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 ZNF77Q15935 545 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 CNSTQ6PJW8 725 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 ADGRD2Q7Z7M1 963 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 MFSD6LQ8IWD5 586 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 ING5Q8WYH8 240 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 ZNF707Q96C28 371 aaPredicted RBP16.79■□□□□ 0.28
CTSA-207ENST00000484855 C2orf16Q68DN1 1984 aa16.79■□□□□ 0.28
CTSA-207ENST00000484855 ZNF197O14709 1029 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 SMAD6O43541 496 aaKnown RBP16.78■□□□□ 0.28
CTSA-207ENST00000484855 GSRP00390 522 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 POU2F2P09086 479 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 STMN1P16949 149 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 CEBPBP17676 345 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 RAB10P61026 200 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 AP1S1P61966 158 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 BST1Q10588 318 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 OVGP1Q12889 678 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 USP4Q13107 963 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 SLC12A1Q13621 1099 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 TAF1AQ15573 450 aaPredicted RBP16.78■□□□□ 0.28
CTSA-207ENST00000484855 TRPM8Q7Z2W7 1104 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 GALNT7Q86SF2 657 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 METTL3Q86U44 580 aaKnown RBP16.78■□□□□ 0.28
CTSA-207ENST00000484855 TMEM25Q86YD3 366 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 PPP1R14CQ8TAE6 165 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 TSNARE1Q96NA8 513 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 SUDS3Q9H7L9 328 aaPredicted RBP16.78■□□□□ 0.28
CTSA-207ENST00000484855 CERS4Q9HA82 394 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 NPHS2Q9NP85 383 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 ABCB8Q9NUT2 735 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 ZMYM5Q9UJ78 669 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 INTS6Q9UL03 887 aaKnown RBP16.78■□□□□ 0.28
CTSA-207ENST00000484855 YBX2Q9Y2T7 364 aaKnown RBP16.78■□□□□ 0.28
CTSA-207ENST00000484855 ANKRD66B4E2M5 251 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 NEDD8-MDP1E9PL57 170 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 GLP2RO95838 553 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 GOT2P00505 430 aaKnown RBP16.78■□□□□ 0.28
CTSA-207ENST00000484855 IL1BP01584 269 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 SLC4A1P02730 911 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 SLC35E2BP0CK96 405 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 ALDH3A1P30838 453 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 CLCN5P51795 746 aa16.78■□□□□ 0.28
CTSA-207ENST00000484855 ZNF140P52738 457 aaPredicted RBP16.78■□□□□ 0.28
CTSA-207ENST00000484855 PLK1P53350 603 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms