RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 PIGHQ14442 188 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 NFATC4Q14934 902 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 NR1I3Q14994 352 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 IQCB1Q15051 598 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 IRF4Q15306 451 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 ELOCQ15369 112 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 NR0B2Q15466 257 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 BOLA3Q53S33 107 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 ZNF542PQ5EBM4 170 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 PRRT3Q5FWE3 981 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 RALGPS1Q5JS13 557 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 E4F1Q66K89 784 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 CAVIN1Q6NZI2 390 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 C19orf48Q6RUI8 117 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 SRLQ86TD4 932 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 ARHGAP12Q8IWW6 846 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 ARFGAP1Q8N6T3 406 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 NIPA2Q8N8Q9 360 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 MAPK15Q8TD08 544 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 LMX1AQ8TE12 382 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 HNRNPLLQ8WVV9 542 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 TEKT4Q8WW24 435 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 SCG3Q8WXD2 468 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 CELF6Q96J87 481 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 EXOC2Q96KP1 924 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 ZNF578Q96N58 590 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 PEBP4Q96S96 227 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 WRAP53Q9BUR4 548 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 LRRC61Q9BV99 259 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 PCDH12Q9NPG4 1184 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 GPATCH2LQ9NWQ4 482 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 SEPT3Q9UH03 358 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 PCSK1NQ9UHG2 260 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 KLF15Q9UIH9 416 aa12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-207ENST00000481335 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 BRINP1O60477 761 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 SOCS5O75159 536 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 RASGRP1O95267 797 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 ANXA6P08133 673 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 HOXC4P09017 264 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 KELP23276 732 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 SERPINB6P35237 376 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 MLLT3P42568 568 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 HK3P52790 923 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 CLDN6P56747 220 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 SEMG2Q02383 582 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 BCL2L1Q07817 233 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 CA9Q16790 459 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 PPP6R3Q5H9R7 873 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 LRRC73Q5JTD7 316 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 TPRG1LQ5T0D9 272 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 ESRP1Q6NXG1 681 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 KDM7AQ6ZMT4 941 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 LRRC49Q8IUZ0 686 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 BBS5Q8N3I7 341 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 NPWQ8N729 165 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 TSEN2Q8NCE0 465 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 OR6C4Q8NGE1 309 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 MBNL1Q9NR56 388 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 CWC15Q9P013 229 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 RCOR3Q9P2K3 495 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 DGKBQ9Y6T7 804 aa12.22□□□□□ -0.45
SQSTM1-207ENST00000481335 DFFAO00273 331 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 TRAFD1O14545 582 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 TLX3O43711 291 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 BUB1BO60566 1050 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 CSO75390 466 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 ELFN1P0C7U0 828 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 LSSP48449 732 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 LIG3P49916 1009 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 PCBP4P57723 403 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 KIAA1024LP59773 190 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 LBRQ14739 615 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 CDKN3Q16667 212 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 WSCD2Q2TBF2 565 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 TDRD12Q587J7 1177 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 FAXCQ5TGI0 409 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 HGSNATQ68CP4 663 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 TMCO3Q6UWJ1 677 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 DPPA4Q7L190 304 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 GKN2Q86XP6 184 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 CAMK1DQ8IU85 385 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 RBFAQ8N0V3 343 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 ARL10Q8N8L6 244 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 NAP1L5Q96NT1 182 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 APOOQ9BUR5 198 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 POLR1BQ9H9Y6 1135 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 IP6K2Q9UHH9 426 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 LCMT1Q9UIC8 334 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 DOLKQ9UPQ8 538 aa12.21□□□□□ -0.45
SQSTM1-207ENST00000481335 ARHGEF17Q96PE2 2063 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-207ENST00000481335 CACNB4O00305 520 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-207ENST00000481335 PDE2AO00408 941 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-207ENST00000481335 TNFRSF10CO14798 259 aa12.2□□□□□ -0.46
SQSTM1-207ENST00000481335 HTRA2O43464 458 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-207ENST00000481335 GCATO75600 419 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms