RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 NFATC3Q12968 1075 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 TUBB2AQ13885 445 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 POLD3Q15054 466 aaPredicted RBP11.72□□□□□ -0.53
LSM2-212ENST00000477182 NOMO1Q15155 1222 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 WHAMMP3Q1A5X7 153 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 LAYNQ6UX15 382 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 XKR5Q6UX68 686 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 ATG14Q6ZNE5 492 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 B4GALNT4Q76KP1 1039 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 EID2Q8N6I1 236 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 PRELID2Q8N945 189 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 TTC13Q8NBP0 860 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 SAP25Q8TEE9 199 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 LRRN4Q8WUT4 740 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 ATG4AQ8WYN0 398 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 BIRC7Q96CA5 298 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 LMLNQ96KR4 655 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 SPON2Q9BUD6 331 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 TUBB2BQ9BVA1 445 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 SLC2A11Q9BYW1 496 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 BTBD1Q9H0C5 482 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 MUC3BQ9H195 1237 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 LRRC19Q9H756 370 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 ABCB8Q9NUT2 735 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 FBXO10Q9UK96 956 aa11.72□□□□□ -0.53
LSM2-212ENST00000477182 ARHGAP42A6NI28 874 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 H7C0C1 242 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 MCF2LO15068 1137 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 FSBPO95073 299 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 HLA-FP30511 346 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 ACSL1P33121 698 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 ATP5OP48047 213 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 ARRB1P49407 418 aaPredicted RBP11.71□□□□□ -0.53
LSM2-212ENST00000477182 EIF3EP60228 445 aaKnown RBP11.71□□□□□ -0.53
LSM2-212ENST00000477182 INSM1Q01101 510 aaPredicted RBP11.71□□□□□ -0.53
LSM2-212ENST00000477182 CKAP4Q07065 602 aaKnown RBP11.71□□□□□ -0.53
LSM2-212ENST00000477182 SNX1Q13596 522 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 PDK1Q15118 436 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 PARP15Q460N3 678 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 ZNF783Q6ZMS7 281 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 ARHGAP36Q6ZRI8 547 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 ZC3H18Q86VM9 953 aaKnown RBP11.71□□□□□ -0.53
LSM2-212ENST00000477182 ZNF354CQ86Y25 554 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 CACUL1Q86Y37 369 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 APCDD1Q8J025 514 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 ZNF557Q8N988 423 aaPredicted RBP11.71□□□□□ -0.53
LSM2-212ENST00000477182 OR2T3Q8NH03 318 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 ARHGEF2Q92974 986 aaKnown RBP11.71□□□□□ -0.53
LSM2-212ENST00000477182 OLFM3Q96PB7 478 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 FEM1AQ9BSK4 669 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 MAGEH1Q9H213 219 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 C10orf88Q9H8K7 445 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 RRAGDQ9NQL2 400 aaPredicted RBP11.71□□□□□ -0.53
LSM2-212ENST00000477182 SEPT3Q9UH03 358 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 GGA2Q9UJY4 613 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 VPS28Q9UK41 221 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 OR51B4Q9Y5P0 310 aa11.71□□□□□ -0.53
LSM2-212ENST00000477182 GOLGA6L10A0A0M3HER8 536 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 K7ENP7 123 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 LIASO43766 372 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 MT-CO3P00414 261 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 EPHX1P07099 455 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 RBP3P10745 1247 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 PABPC1P11940 636 aaKnown RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 MX2P20592 715 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 ETFBP38117 255 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 GARSP41250 739 aaKnown RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 OXCT1P55809 520 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 ZBTB16Q05516 673 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 SERINC3Q13530 473 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 SLC12A1Q13621 1099 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 ZNF234Q14588 700 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 EIF4HQ15056 248 aaKnown RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 CCNG2Q16589 344 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 PITRM1Q5JRX3 1037 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 INO80CQ6PI98 192 aaPredicted RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 KDM7AQ6ZMT4 941 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 BZW1Q7L1Q6 419 aaKnown RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 ATPAF2Q8N5M1 289 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.7□□□□□ -0.54
LSM2-212ENST00000477182 CCNYQ8ND76 341 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 SLC35B2Q8TB61 432 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 ALG14Q96F25 216 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 CCDC97Q96F63 343 aaPredicted RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 FRMD8P1Q9BZ68 369 aaPredicted RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 SGK2Q9HBY8 427 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 ATP13A1Q9HD20 1204 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 THSD1Q9NS62 852 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 IPO11Q9UI26 975 aaKnown RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 INTS6Q9UL03 887 aaKnown RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 DNPEPQ9ULA0 475 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 SPTAN1Q13813 2472 aaKnown RBP11.7□□□□□ -0.54
LSM2-212ENST00000477182 ANKRD36A6QL64 1941 aa11.7□□□□□ -0.54
LSM2-212ENST00000477182 J3KR12 359 aa11.69□□□□□ -0.54
LSM2-212ENST00000477182 PPP1R12AO14974 1030 aaPredicted RBP11.69□□□□□ -0.54
LSM2-212ENST00000477182 TIMM44O43615 452 aa11.69□□□□□ -0.54
LSM2-212ENST00000477182 KDELR3O43731 214 aa11.69□□□□□ -0.54
LSM2-212ENST00000477182 SNAP91O60641 907 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms