RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 PSD3Q9NYI0 1048 aa7.05□□□□□ -1.28
LRCH3-215ENST00000476664 CWC15Q9P013 229 aaKnown RBP7.05□□□□□ -1.28
LRCH3-215ENST00000476664 NKX1-2Q9UD57 310 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-215ENST00000476664 MKLN1Q9UL63 735 aa7.05□□□□□ -1.28
LRCH3-215ENST00000476664 PADI1Q9ULC6 663 aa7.05□□□□□ -1.28
LRCH3-215ENST00000476664 YBX2Q9Y2T7 364 aaKnown RBP7.05□□□□□ -1.28
LRCH3-215ENST00000476664 SH3BP1Q9Y3L3 701 aa7.05□□□□□ -1.28
LRCH3-215ENST00000476664 PCDHB2Q9Y5E7 798 aa7.05□□□□□ -1.28
LRCH3-215ENST00000476664 PTPRZ1P23471 2315 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-215ENST00000476664 CHD7Q9P2D1 2997 aa7.05□□□□□ -1.28
LRCH3-215ENST00000476664 COL3A1P02461 1466 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 KIF20BQ96Q89 1820 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 RNF103-CHMP3A0A140T963 221 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 CCDC195A0A1B0GUA6 201 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 A6NL46 340 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 C3orf70A6NLC5 250 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 RNF103O00237 685 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 ZNF213O14771 459 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 ARHGEF15O94989 841 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 ITGB1P05556 798 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 CHRM4P08173 479 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 KRT13P13646 458 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 TFEBP19484 476 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 SLC6A2P23975 617 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 RPS6KA3P51812 740 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 CAPZA1P52907 286 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 TIRAPP58753 221 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 CEBPZQ03701 1054 aaKnown RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 KLHL30Q0D2K2 578 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 MTAPQ13126 283 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 TUBB3Q13509 450 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 ITGA7Q13683 1181 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 TUBB2AQ13885 445 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 ST3GAL2Q16842 350 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 KIAA0930Q6ICG6 404 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 RGS7BPQ6MZT1 257 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 KDELC1Q6UW63 502 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 CCDC73Q6ZRK6 1079 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 RBPMS2Q6ZRY4 209 aaKnown RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 REXO1L1PQ8IX06 675 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 FAM217AQ8IXS0 508 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 SYCP3Q8IZU3 236 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 HDDC3Q8N4P3 179 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 XXYLT1Q8NBI6 393 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 MCUQ8NE86 351 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 PSMA8Q8TAA3 256 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 TFAP2CQ92754 450 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 SYAP1Q96A49 352 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 RPL10LQ96L21 214 aaKnown RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 HAPLN3Q96S86 360 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 FAM118BQ9BPY3 351 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 TUBB2BQ9BVA1 445 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 ZNF552Q9H707 407 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 TRIM36Q9NQ86 728 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 MCM9Q9NXL9 1143 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 OGFRQ9NZT2 677 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 ACTR3BQ9P1U1 418 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 PEMTQ9UBM1 199 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 IL19Q9UHD0 177 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 LEF1Q9UJU2 399 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 INTS6Q9UL03 887 aaKnown RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 EPN1Q9Y6I3 576 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-215ENST00000476664 MGAMO43451 1857 aa7.04□□□□□ -1.28
LRCH3-215ENST00000476664 ADGRA2Q96PE1 1338 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 A0A1W2PRV1 198 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 OR6C76A6NM76 312 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 LIASO43766 372 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 HS6ST1O60243 411 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 ECE2O60344 883 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 CCNT1O60563 726 aaKnown RBP7.03□□□□□ -1.28
LRCH3-215ENST00000476664 TLR2O60603 784 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 DIAPH2O60879 1101 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 GCNT3O95395 438 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 HLA-DOAP06340 250 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 HEXBP07686 556 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 SPATA31D3P0C874 917 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 SRCP12931 536 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 TMEM11P17152 192 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 TCEA1P23193 301 aaKnown RBP7.03□□□□□ -1.28
LRCH3-215ENST00000476664 HOXA11P31270 313 aaPredicted RBP7.03□□□□□ -1.28
LRCH3-215ENST00000476664 FMO4P31512 558 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 PRPHP41219 470 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 CASP3P42574 277 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 RAB28P51157 221 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 YBEYP58557 167 aaPredicted RBP7.03□□□□□ -1.28
LRCH3-215ENST00000476664 HTD2P86397 168 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 TFF2Q03403 129 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 ALKBH1Q13686 389 aaKnown RBP7.03□□□□□ -1.28
LRCH3-215ENST00000476664 ZSCAN23Q3MJ62 389 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 FBLN7Q53RD9 439 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 ZRANB3Q5FWF4 1079 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 ZNF667Q5HYK9 610 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 C9orf50Q5SZB4 431 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 AGBL4Q5VU57 503 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 ATG9BQ674R7 924 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 ANKS6Q68DC2 871 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 SPATA31D4Q6ZUB0 917 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 PPP1R42Q7Z4L9 355 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 STK32CQ86UX6 486 aa7.03□□□□□ -1.28
LRCH3-215ENST00000476664 IQUBQ8NA54 791 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms