RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.43□□□□□ -1.22
RPUSD3-212ENST00000466141 PDP2Q9P2J9 529 aa7.43□□□□□ -1.22
RPUSD3-212ENST00000466141 MYO1AQ9UBC5 1043 aa7.43□□□□□ -1.22
RPUSD3-212ENST00000466141 DNAI1Q9UI46 699 aa7.43□□□□□ -1.22
RPUSD3-212ENST00000466141 ANAPC5Q9UJX4 755 aa7.43□□□□□ -1.22
RPUSD3-212ENST00000466141 C15orf41Q9Y2V0 281 aa7.43□□□□□ -1.22
RPUSD3-212ENST00000466141 WNT6Q9Y6F9 365 aa7.43□□□□□ -1.22
RPUSD3-212ENST00000466141 MYOFQ9NZM1 2061 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 WDR91A4D1P6 747 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 A6NNZ2 444 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 K7EQS6 105 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CLDN5O00501 218 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CDK2AP1O14519 115 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 KPNA5O15131 536 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 SPOPO43791 374 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 C1QL1O75973 258 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 TRIM16O95361 564 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 AFPP02771 609 aaKnown RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CD59P13987 128 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CTNNA2P26232 953 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 KRT9P35527 623 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 ADCY8P40145 1251 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 MTIF2P46199 727 aaKnown RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 LIG3P49916 1009 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 SLC12A2P55011 1212 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 POLR2GP62487 172 aaKnown RBP eCLIP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 RPL10AP62906 217 aaKnown RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 S100A12P80511 92 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 ORC1Q13415 861 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CUL2Q13617 745 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 BLMHQ13867 455 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 DHX34Q14147 1143 aaKnown RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 MTF1Q14872 753 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 PDGFRLQ15198 375 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 ZNF423Q2M1K9 1284 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 TUBB8Q3ZCM7 444 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 C5orf22Q49AR2 442 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 MINDY4Q4G0A6 757 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 PDCD4Q53EL6 469 aaKnown RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 SDHAF4Q5VUM1 108 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CDKAL1Q5VV42 579 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 IL23RQ5VWK5 629 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 TTC23LQ6PF05 361 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 SLC23A3Q6PIS1 610 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 SARM1Q6SZW1 724 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 C6orf89Q6UWU4 347 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 TMEM92Q6UXU6 159 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 PAQR9Q6ZVX9 377 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 GALNT7Q86SF2 657 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 TBC1D1Q86TI0 1168 aaPredicted RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 ACOT1Q86TX2 421 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 SYT12Q8IV01 421 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 RHOT2Q8IXI1 618 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CRYBG2Q8N1P7 616 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CPA6Q8N4T0 437 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 MINDY1Q8N5J2 469 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 ZMIZ2Q8NF64 920 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CEP70Q8NHQ1 597 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 RFWD2Q8NHY2 731 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 OLIG1Q8TAK6 271 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 SLC9A6Q92581 669 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 GFM2Q969S9 779 aaKnown RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 MYRFLQ96LU7 910 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 SLC22A12Q96S37 553 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 TTLL2Q9BWV7 592 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 NDEL1Q9GZM8 345 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 TPK1Q9H3S4 243 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 HAUS4Q9H6D7 363 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CRLF2Q9HC73 371 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 FAM49BQ9NUQ9 324 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CACNA2D2Q9NY47 1150 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 GCNT4Q9P109 453 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 GIMAP2Q9UG22 337 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 PTBP2Q9UKA9 531 aaKnown RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 PILRBQ9UKJ0 227 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 MAPRE3Q9UPY8 281 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CBY1Q9Y3M2 126 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 CHTOPQ9Y3Y2 248 aaKnown RBP7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 NFE2L3Q9Y4A8 694 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 PLXNB3Q9ULL4 1909 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 GON4LQ3T8J9 2241 aa7.42□□□□□ -1.22
RPUSD3-212ENST00000466141 PCDH15Q96QU1 1955 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 A0A1B0GVC2 190 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 SYCE3A1L190 88 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 SNTNA6NMZ2 147 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 UPK3BL1B0FP48 263 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 UPK3BL2E5RIL1 263 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 F8VP50 259 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 GOLGA8RI6L899 631 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 DDX3YO15523 660 aaKnown RBP7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 MAP3K13O43283 966 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 OPHN1O60890 802 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 TNFRSF21O75509 655 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 ADCY5O95622 1261 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 F11P03951 625 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 ATP5BP06576 529 aaKnown RBP7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 PDHA1P08559 390 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 ENO2P09104 434 aaPredicted RBP7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 FTH1P19P0C7X4 201 aa7.41□□□□□ -1.22
RPUSD3-212ENST00000466141 CSH1P0DML2 217 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms