RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 HERC6Q8IVU3 1022 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 SPATA6LQ8N4H0 392 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 HEXDCQ8WVB3 486 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 AUTS2Q8WXX7 1259 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 TSPAN17Q96FV3 270 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 MRPL57Q9BQC6 102 aaKnown RBP20.34■□□□□ 0.85
CCM2-203ENST00000461377 ARL5AQ9Y689 179 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 OR51F1A6NGY5 319 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 PRR5-ARHGAP8B1AHC4 643 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 LATS1O95835 1130 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 EPHB3P54753 998 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 ARHGAP8P85298 464 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 USP4Q13107 963 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 RCN2Q14257 317 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 CYTH1Q15438 398 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 EPGNQ6UW88 154 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 TEX9Q8N6V9 391 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 TDRD5Q8NAT2 981 aaKnown RBP20.33■□□□□ 0.84
CCM2-203ENST00000461377 DNAJC1Q96KC8 554 aaKnown RBP20.33■□□□□ 0.84
CCM2-203ENST00000461377 TBATAQ96M53 351 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 RAP2CQ9Y3L5 183 aa20.33■□□□□ 0.84
CCM2-203ENST00000461377 CARNS1A5YM72 827 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 INSIG1O15503 277 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 RPP40O75818 363 aaKnown RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 F11P03951 625 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 MBL2P11226 248 aaPredicted RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 CCND1P24385 295 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 WDR5P61964 334 aaKnown RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 ILF2Q12905 390 aaKnown RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 WASHC2DQ5SRD0 308 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 VWA5B1Q5TIE3 1220 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 RNF219Q5W0B1 726 aaPredicted RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 C16orf59Q7L2K0 433 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 GPR150Q8NGU9 434 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 TTC8Q8TAM2 541 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 ILKAPQ9H0C8 392 aaPredicted RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 COG4Q9H9E3 785 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 ZNF334Q9HCZ1 680 aaPredicted RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.32■□□□□ 0.84
CCM2-203ENST00000461377 SMPD4Q9NXE4 827 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 MAFFQ9ULX9 164 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 WISP3O95389 354 aaPredicted RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 GOT2P00505 430 aaKnown RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 CHRNGP07510 517 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 MPSTP25325 297 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 ZNF783Q6ZMS7 281 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 LDB1Q86U70 411 aaPredicted RBP20.32■□□□□ 0.84
CCM2-203ENST00000461377 PNPLA1Q8N8W4 532 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 BEGAINQ9BUH8 593 aa20.32■□□□□ 0.84
CCM2-203ENST00000461377 SPECC1L-ADORA2AF8WAN1 911 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 CBX4O00257 560 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 DIAPH2O60879 1101 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 CES1P23141 567 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 ITGB8P26012 769 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 CPA2P48052 419 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 SCNN1BP51168 640 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 HK2P52789 917 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 NAGLUP54802 743 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 SMAD3P84022 425 aaKnown RBP20.31■□□□□ 0.84
CCM2-203ENST00000461377 NSUN2Q08J23 767 aaKnown RBP eCLIP20.31■□□□□ 0.84
CCM2-203ENST00000461377 ASPHQ12797 758 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 PTPRCAPQ14761 206 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 FAM83EQ2M2I3 478 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 TECRLQ5HYJ1 363 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 TMC7Q7Z402 723 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 OR13C4Q8NGS5 318 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 UNKQ9C0B0 810 aaKnown RBP20.31■□□□□ 0.84
CCM2-203ENST00000461377 SUDS3Q9H7L9 328 aaPredicted RBP20.31■□□□□ 0.84
CCM2-203ENST00000461377 IL21Q9HBE4 155 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 SCUBE2Q9NQ36 999 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 MRPL17Q9NRX2 175 aaKnown RBP20.31■□□□□ 0.84
CCM2-203ENST00000461377 VWA7Q9Y334 891 aa20.31■□□□□ 0.84
CCM2-203ENST00000461377 ARIH1Q9Y4X5 557 aaPredicted RBP20.31■□□□□ 0.84
CCM2-203ENST00000461377 CCDC162PA2VCL2 907 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 B2RBV5 119 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 BUD23O43709 281 aaKnown RBP20.3■□□□□ 0.84
CCM2-203ENST00000461377 GREM1O60565 184 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 GLP2RO95838 553 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 LTA4HP09960 611 aaKnown RBP20.3■□□□□ 0.84
CCM2-203ENST00000461377 PIRTP0C851 137 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 CSF2RAP15509 400 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 ARF5P84085 180 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 CSHL1Q14406 222 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 ARL13AQ5H913 290 aaPredicted RBP20.3■□□□□ 0.84
CCM2-203ENST00000461377 CFAP157Q5JU67 520 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 TMPRSS6Q8IU80 811 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 ADAMTS19Q8TE59 1207 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 SCG3Q8WXD2 468 aaKnown RBP20.3■□□□□ 0.84
CCM2-203ENST00000461377 MOCOSQ96EN8 888 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 EXOC2Q96KP1 924 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 UBXN10Q96LJ8 280 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 SLC22A12Q96S37 553 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 TDRD1Q9BXT4 1180 aaKnown RBP20.3■□□□□ 0.84
CCM2-203ENST00000461377 MUC3BQ9H195 1237 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 MMADHCQ9H3L0 296 aaPredicted RBP20.3■□□□□ 0.84
CCM2-203ENST00000461377 MATN2O00339 956 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 CD3EAPO15446 510 aaKnown RBP20.3■□□□□ 0.84
CCM2-203ENST00000461377 TEX28O15482 410 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 LILRB3O75022 631 aa20.3■□□□□ 0.84
CCM2-203ENST00000461377 EFCAB14O75071 495 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms