RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PHTF1Q9UMS5 762 aa28.18■■■□□ 2.1
SMARCC1-203ENST00000454240 DMTF1Q9Y222 760 aa28.18■■■□□ 2.1
SMARCC1-203ENST00000454240 PCDH15Q96QU1 1955 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 PIEZO1Q92508 2521 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 PRR5-ARHGAP8B1AHC4 643 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 CD68P34810 354 aaPredicted RBP28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 CD86P42081 329 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 SETMARQ53H47 684 aaPredicted RBP28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 TCEAL6Q6IPX3 200 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 ERAP2Q6P179 960 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 DARS2Q6PI48 645 aaKnown RBP28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 PRR23CQ6ZRP0 262 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 ZNF567Q8N184 647 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 PAF1Q8N7H5 531 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 SLC35B2Q8TB61 432 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 TCEAL3Q969E4 200 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 TADA1Q96BN2 335 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 TDRD1Q9BXT4 1180 aaKnown RBP28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 USP29Q9HBJ7 922 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 SLC6A14Q9UN76 642 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 PPIL1Q9Y3C6 166 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 CACNA1EQ15878 2313 aa28.17■■■□□ 2.1
SMARCC1-203ENST00000454240 FOXD2O60548 495 aaPredicted RBP28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 CPP00450 1065 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 PRKCGP05129 697 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 PDHA1P08559 390 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 MSNP26038 577 aaKnown RBP28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 MMP12P39900 470 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 RACK1P63244 317 aaKnown RBP28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 IRX4P78413 519 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 FGL2Q14314 439 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 PIH1D2Q8WWB5 315 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 KLK6Q92876 244 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 C1QTNF2Q9BXJ5 285 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 SLC17A9Q9BYT1 436 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 KLHL8Q9P2G9 620 aaPredicted RBP28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 TRHDEQ9UKU6 1024 aa28.16■■■□□ 2.1
SMARCC1-203ENST00000454240 PTPRZ1P23471 2315 aaPredicted RBP28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 IGLON5A6NGN9 336 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 ZNF189O75820 626 aaPredicted RBP28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 PRLP01236 227 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 CFIP05156 583 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 CXCR5P32302 372 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 AFF3P51826 1226 aaKnown RBP28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 SLC14A2Q15849 920 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 PID1Q7Z2X4 250 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 ASB12Q8WXK4 309 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 SERAC1Q96JX3 654 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 SLC6A18Q96N87 628 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 RBM15Q96T37 977 aaKnown RBP eCLIP28.15■■■□□ 2.16e-7■□□□□ 11.3
SMARCC1-203ENST00000454240 FERMT1Q9BQL6 677 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 NUSAP1Q9BXS6 441 aaKnown RBP28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 FRMD8P1Q9BZ68 369 aaPredicted RBP28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 KCND1Q9NSA2 647 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 CHKBQ9Y259 395 aa28.15■■■□□ 2.1
SMARCC1-203ENST00000454240 GVINP1Q7Z2Y8 2422 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 TP53BP1Q12888 1972 aaPredicted RBP28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 WNT9AO14904 365 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 SLC31A1O15431 190 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 KCNN4O15554 427 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 MMP20O60882 483 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 CA4P22748 312 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 NAPEPLDQ6IQ20 393 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 C12orf50Q8NA57 414 aaPredicted RBP28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 CXorf40AQ8TE69 158 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 WRAP53Q9BUR4 548 aaKnown RBP28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 PCDH9Q9HC56 1237 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 DNPEPQ9ULA0 475 aa28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.14■■■□□ 2.1
SMARCC1-203ENST00000454240 CFAP69A5D8W1 941 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 PRAMEF26H0Y7S4 382 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 CEP104O60308 925 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 PAK4O96013 591 aaPredicted RBP28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 ATP1A1P05023 1023 aaKnown RBP28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 PRLRP16471 622 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 NFKB1P19838 968 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 GRIA4P48058 902 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 FAM193AP78312 1265 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 SEMG2Q02383 582 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 RALGDSQ12967 914 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 SIX1Q15475 284 aaPredicted RBP28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 DPPA4Q7L190 304 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 ADAT2Q7Z6V5 191 aaKnown RBP28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 KIAA2013Q8IYS2 634 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 SPATA22Q8NHS9 363 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 SCRN2Q96FV2 425 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 FCRL5Q96RD9 977 aa28.13■■■□□ 2.09
SMARCC1-203ENST00000454240 A0A1W2PR77 199 aa28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 LNP1A1A4G5 178 aa28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 MT-CYBP00156 380 aaPredicted RBP28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 HNRNPA2B1P22626 353 aaKnown RBP28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 NFKBIAP25963 317 aa28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 CSNK1EP49674 416 aaKnown RBP28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 RPL26P61254 145 aaKnown RBP28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 TMEM145Q8NBT3 493 aa28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 ATG4AQ8WYN0 398 aa28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 PBKQ96KB5 322 aa28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 LENG8Q96PV6 779 aaPredicted RBP28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 MCCC1Q96RQ3 725 aaPredicted RBP28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 B4GALT6Q9UBX8 382 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms