RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 LSSP48449 732 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 LIG3P49916 1009 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 UCNP55089 124 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 ERVPABLB-1P60509 514 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 POLR2LP62875 67 aaKnown RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 OGDHQ02218 1023 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 SPIDRQ14159 915 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 ZNF235Q14590 738 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 RFTN1Q14699 578 aaPredicted RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 NFATC4Q14934 902 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 C3orf38Q5JPI3 329 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 PLEKHA7Q6IQ23 1121 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 ENPP7Q6UWV6 458 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 APTXQ7Z2E3 356 aaKnown RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 SRLQ86TD4 932 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 PSTKQ8IV42 348 aaKnown RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 BBS5Q8N3I7 341 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 SDR16C5Q8N3Y7 309 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 CRELD1Q96HD1 420 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 KCTD15Q96SI1 283 aaPredicted RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 BOCQ9BWV1 1114 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 TCEAL2Q9H3H9 227 aaPredicted RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 HAUS4Q9H6D7 363 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 CAAP1Q9H8G2 361 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 ZWILCHQ9H900 591 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 PDFQ9HBH1 243 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 GULP1Q9UBP9 304 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 CNOT8Q9UFF9 292 aaKnown RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 ASXL3Q9C0F0 2248 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 RP1P56715 2156 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 A0A1W2PQC6 194 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 H3BRJ5 948 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 CACNB4O00305 520 aaPredicted RBP11.86□□□□□ -0.51
TTC28-203ENST00000442232 GCATO75600 419 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 SERPINC1P01008 464 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 TNFP01375 233 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 FTLP02792 175 aaPredicted RBP11.86□□□□□ -0.51
TTC28-203ENST00000442232 GZMAP12544 262 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 TSHRP16473 764 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 ERCC2P18074 760 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 ITIH2P19823 946 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 TGM2P21980 687 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 KELP23276 732 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 CSNK1DP48730 415 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 HK3P52790 923 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 TMPRSS3P57727 454 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 CXADRP78310 365 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 IL10RBQ08334 325 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 MTM1Q13496 603 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 INPP5AQ14642 412 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 ISXQ2M1V0 245 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 WSCD2Q2TBF2 565 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 TDRD12Q587J7 1177 aaKnown RBP11.86□□□□□ -0.51
TTC28-203ENST00000442232 TMCO4Q5TGY1 634 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 CRTC1Q6UUV9 634 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 GPR155Q7Z3F1 870 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 RD3Q7Z3Z2 195 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 CAMK1DQ8IU85 385 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 SPACA3Q8IXA5 215 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 SLC35F3Q8IY50 421 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 LZTR1Q8N653 840 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 ARL10Q8N8L6 244 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 TSEN2Q8NCE0 465 aaKnown RBP11.86□□□□□ -0.51
TTC28-203ENST00000442232 FNIP1Q8TF40 1166 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 NSMCE1Q8WV22 266 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 KCNE4Q8WWG9 221 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 NAF1Q96HR8 494 aaKnown RBP11.86□□□□□ -0.51
TTC28-203ENST00000442232 WDR92Q96MX6 357 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 CCDC3Q9BQI4 270 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 APOOQ9BUR5 198 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 EDEM3Q9BZQ6 932 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 SLC39A8Q9C0K1 460 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 HSD3B7Q9H2F3 369 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 PRORYQ9H606 182 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 SIRPGQ9P1W8 387 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 MYO1AQ9UBC5 1043 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 SEPT3Q9UH03 358 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 PADI4Q9UM07 663 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 GPR34Q9UPC5 381 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 SATB2Q9UPW6 733 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 PTPRQQ9UMZ3 2332 aa11.86□□□□□ -0.51
TTC28-203ENST00000442232 FASNP49327 2511 aaKnown RBP11.85□□□□□ -0.51
TTC28-203ENST00000442232 TEX51A0A1B0GUA7 166 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.85□□□□□ -0.51
TTC28-203ENST00000442232 TMEM191CA6NGB0 347 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 YY2O15391 372 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 DXOO77932 396 aaKnown RBP11.85□□□□□ -0.51
TTC28-203ENST00000442232 PRKCGP05129 697 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 MIPP30301 263 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
TTC28-203ENST00000442232 ZNF165P49910 485 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 SCNN1BP51168 640 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 SRP54P61011 504 aaKnown RBP11.85□□□□□ -0.51
TTC28-203ENST00000442232 AP1S1P61966 158 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 TLE3Q04726 772 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 AGERQ15109 404 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 TCEA2Q15560 299 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 CA9Q16790 459 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 PERM1Q5SV97 790 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms