RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 STARD3Q14849 445 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 CRYMQ14894 314 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 MLF2Q15773 248 aaPredicted RBP16■□□□□ 0.15
MCF2L-217ENST00000441756 SLC44A4Q53GD3 710 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 PKN3Q6P5Z2 889 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 ZNF449Q6P9G9 518 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 TXNDC11Q6PKC3 985 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 UNC5AQ6ZN44 842 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 TPRG1Q6ZUI0 275 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 USP45Q70EL2 814 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 GOLGA6L1Q8N7Z2 621 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 SERBP1Q8NC51 408 aaKnown RBP eCLIP16■□□□□ 0.15
MCF2L-217ENST00000441756 TMIEQ8NEW7 156 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 GRIN3AQ8TCU5 1115 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 BRSK1Q8TDC3 778 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 BLOC1S5Q8TDH9 187 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 ZNF669Q96BR6 464 aaPredicted RBP16■□□□□ 0.15
MCF2L-217ENST00000441756 ECHDC3Q96DC8 303 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 WDR83Q9BRX9 315 aaKnown RBP16■□□□□ 0.15
MCF2L-217ENST00000441756 EPB41L4BQ9H329 900 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 ZNF446Q9NWS9 450 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 RIMKLBQ9ULI2 386 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 STON1Q9Y6Q2 735 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 RPS6KL1Q9Y6S9 549 aa16■□□□□ 0.15
MCF2L-217ENST00000441756 TSPAN11A1L157 253 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 C2orf81A6NN90 581 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 C1QTNF3-AMACRE9PGA6 284 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 K7EQS6 105 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 SYNCRIPO60506 623 aaKnown RBP15.99■□□□□ 0.15
MCF2L-217ENST00000441756 RNASEH1O60930 286 aaKnown RBP15.99■□□□□ 0.15
MCF2L-217ENST00000441756 SIN3BO75182 1162 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 PRLP01236 227 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 UGT2B4P06133 528 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 SSTR1P30872 391 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 NTSR1P30989 418 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 KIR2DL1P43626 348 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-217ENST00000441756 PRKCQQ04759 706 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 NAB1Q13506 487 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 QPCTQ16769 361 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 ZNF805Q5CZA5 627 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 FAM46CQ5VWP2 391 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 FSTL4Q6MZW2 842 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 CAPN12Q6ZSI9 719 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 CYS1Q717R9 158 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 GLT6D1Q7Z4J2 308 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 TMEM135Q86UB9 458 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 IGDCC3Q8IVU1 814 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 IQCKQ8N0W5 287 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 AGGF1Q8N302 714 aaeCLIP15.99■□□□□ 0.15
MCF2L-217ENST00000441756 CHST14Q8NCH0 376 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 FAM3CQ92520 227 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 CDKL2Q92772 493 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 SHDQ96IW2 340 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 NSMCE3Q96MG7 304 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 CYTH2Q99418 400 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 MAGEE1Q9HCI5 957 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 FBRSL1Q9HCM7 1045 aaKnown RBP15.99■□□□□ 0.15
MCF2L-217ENST00000441756 PRDM6Q9NQX0 595 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 DYRK4Q9NR20 520 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 CACNA2D2Q9NY47 1150 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.99■□□□□ 0.15
MCF2L-217ENST00000441756 DKK3Q9UBP4 350 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 FETUBQ9UGM5 382 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 MRPS17Q9Y2R5 130 aaKnown RBP15.99■□□□□ 0.15
MCF2L-217ENST00000441756 WASF2Q9Y6W5 498 aa15.99■□□□□ 0.15
MCF2L-217ENST00000441756 A0A0J9YYE9 177 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 EXOC1LA0A1B0GW35 172 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 CAPN8A6NHC0 703 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 LEFTY1O75610 366 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 EGFP01133 1207 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 TRBC1P01850 177 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 PDHA1P08559 390 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 HLA-EP13747 358 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 XPAP23025 273 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-217ENST00000441756 PRKCHP24723 683 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 GKP32189 559 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 TIE1P35590 1138 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 SUOXP51687 545 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 SEC13P55735 322 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 GPX6P59796 221 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 TAF1AQ15573 450 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-217ENST00000441756 ANKRD20A4Q4UJ75 823 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 C9orf64Q5T6V5 341 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 TSTD2Q5T7W7 516 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 ZNF852Q6ZMS4 543 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 SFTPA1Q8IWL2 248 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 STK40Q8N2I9 435 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 ZNF366Q8N895 744 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 PIH1D2Q8WWB5 315 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 ATXN2LQ8WWM7 1075 aaKnown RBP15.98■□□□□ 0.15
MCF2L-217ENST00000441756 KLHL32Q96NJ5 620 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 ZIM3Q96PE6 472 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 ROPN1BQ9BZX4 212 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-217ENST00000441756 ACSS3Q9H6R3 686 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 ROPN1Q9HAT0 212 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-217ENST00000441756 FAM169AQ9Y6X4 670 aa15.98■□□□□ 0.15
MCF2L-217ENST00000441756 TCRBV9S1A1TA0A576 114 aa15.97■□□□□ 0.15
MCF2L-217ENST00000441756 KPNA3O00505 521 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-217ENST00000441756 OPA1O60313 960 aa15.97■□□□□ 0.15
MCF2L-217ENST00000441756 CYP2A6P11509 494 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms