RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 QSOX1O00391 747 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ANGPT2O15123 496 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 INSIG1O15503 277 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 PIRTP0C851 137 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ADRA1DP25100 572 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 FAM189BP81408 668 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 VITQ6UXI7 678 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 DET1Q7L5Y6 550 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 SLC44A2Q8IWA5 706 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 SERPINI2O75830 405 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 RBP1P09455 135 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 MS4A13Q5J8X5 152 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 DEPDC1Q5TB30 811 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 PRELID2Q8N945 189 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 ADAM7Q9H2U9 754 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 USE1Q9NZ43 259 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 GP5P40197 560 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 HCAR3P49019 387 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 CCDC142Q17RM4 750 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 AGBL2Q5U5Z8 902 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 HMGB4Q8WW32 186 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 BCLAF3A2AJT9 711 aaKnown RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 C2orf78A6NCI8 922 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 MPOP05164 745 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 DGKEP52429 567 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 CSHL1Q14406 222 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 TEAD4Q15561 434 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 LY6G5CQ5SRR4 150 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 NEPROQ6NW34 567 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 ZIM3Q96PE6 472 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 ZFYVE1Q9HBF4 777 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 C2orf71A6NGG8 1288 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 MYOGP15173 224 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 CXCR3P49682 368 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 ALDH6A1Q02252 535 aaKnown RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 DSC2Q02487 901 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 STX3Q13277 289 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 TCEA2Q15560 299 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 FAM171BQ6P995 826 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 EFL1Q7Z2Z2 1120 aaKnown RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 ELMO1Q92556 727 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 JADE3Q92613 823 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 NOP53Q9NZM5 478 aaKnown RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 ERVK-10P10266 1014 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 GPRIN1Q7Z2K8 1008 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 CLEC4FQ8N1N0 589 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 CCDC126Q96EE4 140 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 P2RY13Q9BPV8 354 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 PHPT1Q9NRX4 125 aaPredicted RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 AKAP7Q9P0M2 348 aaPredicted RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 ZNF711Q9Y462 761 aa13□□□□□ -0.33
PTCH1-207ENST00000429896 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
PTCH1-207ENST00000429896 GOLGA8TH3BQL2 631 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 FSBPO95073 299 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 TTPAP49638 278 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 PLEKHM3Q6ZWE6 761 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 HDDC3Q8N4P3 179 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 HLA-CQ95604 372 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 MAGED4Q96JG8 741 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 GBA3Q9H227 469 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 IL36AQ9UHA7 158 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 GRIN2DO15399 1336 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 EDDM13A0A1B0GTR0 161 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 AIM2O14862 343 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 CXCL10P02778 98 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 TCEAL5Q5H9L2 206 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 TMEM139Q8IV31 216 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 OR9Q1Q8NGQ5 310 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 TMLHEQ9NVH6 421 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 SLC24A2Q9UI40 661 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 H3BQ06 376 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-207ENST00000429896 KPNA5O15131 536 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 CRABP2P29373 138 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
PTCH1-207ENST00000429896 MAGEC3Q8TD91 643 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 SLC25A51Q9H1U9 297 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 MAN2B1O00754 1011 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 INPP4BO15327 924 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 FTH1P02794 183 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 HNRNPDQ14103 355 aaKnown RBP12.99□□□□□ -0.33
PTCH1-207ENST00000429896 ZBTB6Q15916 424 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 VN1R5Q7Z5H4 357 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 ZNF599Q96NL3 588 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 NPY6RQ99463 290 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 DTNAQ9Y4J8 743 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 GABRDO14764 452 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 DGKAP23743 735 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 PTPN7P35236 360 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 AFF1P51825 1210 aaKnown RBP12.99□□□□□ -0.33
PTCH1-207ENST00000429896 SKOR1P84550 965 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 PRUNE1Q86TP1 453 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 RTN4RL1Q86UN2 441 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-207ENST00000429896 LRRTM3Q86VH5 581 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 SUGP1Q8IWZ8 645 aaKnown RBP12.99□□□□□ -0.33
PTCH1-207ENST00000429896 SIX5Q8N196 739 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 SH2D3CQ8N5H7 860 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms