RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TTC24A2A3L6 582 aaPredicted RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 PTGESO14684 152 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 HTRA2O43464 458 aaPredicted RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 HSPA1AP0DMV8 641 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 HSPA1BP0DMV9 641 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC7A1P30825 629 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CSRP3P50461 194 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 GEMP55040 296 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 MAXP61244 160 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 POU4F1Q01851 419 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 PRKCQQ04759 706 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 DCTN2Q13561 401 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 DUSP28Q4G0W2 176 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SAMD4BQ5PRF9 694 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 HMBOX1Q6NT76 420 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 POTEHQ6S545 545 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SPPL2CQ8IUH8 684 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CLVS1Q8IUQ0 354 aaPredicted RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 PELI3Q8N2H9 469 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SMG8Q8ND04 991 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 DQX1Q8TE96 717 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 FCRL5Q96RD9 977 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 DCUN1D5Q9BTE7 237 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 OLAHQ9NV23 265 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CRYL1Q9Y2S2 319 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 MTF2Q9Y483 593 aaPredicted RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 PTGDR2Q9Y5Y4 395 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CASTOR2A6NHX0 329 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SOCS2O14508 198 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 MAGEB3O15480 346 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 MSI1O43347 362 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 HLA-DQB2P05538 268 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 C8BP07358 591 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 LTA4HP09960 611 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF23P17027 643 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 KCNC1P48547 511 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CLCNKBP51801 687 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 WNT3AP56704 352 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 PPIL2Q13356 520 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CAPRIN1Q14444 709 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 RPS6KA2Q15349 733 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 VPS26BQ4G0F5 336 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 TBCELQ5QJ74 424 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 GPR158Q5T848 1215 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CBR4Q8N4T8 237 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 C2CD4AQ8NCU7 369 aaPredicted RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SHCBP1Q8NEM2 672 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 OR52K2Q8NGK3 314 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SCAMP5Q8TAC9 235 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 GAB3Q8WWW8 586 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 LPPQ93052 612 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC45A3Q96JT2 553 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 FAR2Q96K12 515 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 LMCD1Q9NZU5 365 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 A0A0J9YVX5 310 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 H3BNH8 94 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 PPP6CO00743 305 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 GABRDO14764 452 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 TRIM24O15164 1050 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 FOXD2O60548 495 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF189O75820 626 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 CLIC3O95833 236 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 GNAO1P09471 354 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 CCNCP24863 283 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 DNAJB2P25686 324 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 STT3AP46977 705 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 CDC42EP1Q00587 391 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 MYBPC3Q14896 1274 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 TECRLQ5HYJ1 363 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 TTC33Q6PID6 262 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 DDIASQ8IXT1 998 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 MIPOL1Q8TD10 442 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 RPL10LQ96L21 214 aaKnown RBP7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 C3orf30Q96M34 536 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 ENTPD7Q9NQZ7 604 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 PNPLA3Q9NST1 481 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 POLR2AP24928 1970 aaKnown RBP7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 DNAH12Q6ZR08 3092 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 OR51F1A6NGY5 319 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 UBFD1O14562 309 aaKnown RBP7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 MAFKO60675 156 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 PAGE1O75459 146 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 RBP1P09455 135 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 CHRM3P20309 590 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 DNAJB13P59910 316 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 TXNL4AP83876 142 aaKnown RBP7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 FBXO48Q5FWF7 155 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 HECTD2Q5U5R9 776 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 PM20D1Q6GTS8 502 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 LIMS2Q7Z4I7 341 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 PIM3Q86V86 326 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 CARM1Q86X55 608 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 CNTN4Q8IWV2 1026 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 ARHGAP12Q8IWW6 846 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 HASPINQ8TF76 798 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 CYGBQ8WWM9 190 aa7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 EMID1Q96A84 441 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-202ENST00000425518 HSPBAP1Q96EW2 488 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms