RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 TTC19Q6DKK2 380 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 MTSS1LQ765P7 747 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 GLT6D1Q7Z4J2 308 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SLC26A11Q86WA9 606 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ETFBKMTQ8IXQ9 262 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PNPLA1Q8N8W4 532 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 CHST14Q8NCH0 376 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 OR6P1Q8NGX9 317 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 TADA1Q96BN2 335 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 CHFRQ96EP1 664 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PGM2Q96G03 612 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 TRIB3Q96RU7 358 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 KLF6Q99612 283 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 CDX2Q99626 313 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 SELENOSQ9BQE4 189 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 TMEM109Q9BVC6 243 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 KIFC1Q9BW19 673 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 STMN4Q9H169 189 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 UBE2ZQ9H832 354 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 ARNT2Q9HBZ2 717 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 KCNK9Q9NPC2 374 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MOCS1Q9NZB8 636 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SLC24A2Q9UI40 661 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 FBXO10Q9UK96 956 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ARIH1Q9Y4X5 557 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 PSAT1Q9Y617 370 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MYO10Q9HD67 2058 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 GRXCR2A6NFK2 248 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 FAM159BA6NKW6 160 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 C2CD4DB7Z1M9 353 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 WASH3PC4AMC7 463 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 GOLGA8RI6L899 631 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ECI2O75521 394 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 TCEA3O75764 348 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ALDH1A2O94788 518 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 GSTA2P09210 222 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PAMP19021 973 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 POU3F3P20264 500 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 PRKCHP24723 683 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SERPINA4P29622 427 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MAPK8P45983 427 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PRAMEP78395 509 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 RAD51Q06609 339 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MGAT5Q09328 741 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 THOC5Q13769 683 aaKnown RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 PTPRNQ16849 979 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 GAB4Q2WGN9 574 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 CARD16Q5EG05 197 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 AGBL2Q5U5Z8 902 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SERPINA13PQ6UXR4 307 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PTAR1Q7Z6K3 402 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 C4orf33Q8N1A6 199 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PCDH20Q8N6Y1 951 aaKnown RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 TERB1Q8NA31 727 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 OR13C4Q8NGS5 318 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 CSGALNACT1Q8TDX6 532 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 DCAKDQ8WVC6 231 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SLC44A1Q8WWI5 657 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SUSD6Q92537 303 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 TTC17Q96AE7 1141 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MYO19Q96H55 970 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SUDS3Q9H7L9 328 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 BPIFA1Q9NP55 256 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SPO11Q9Y5K1 396 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MUC3AQ02505 3323 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 IQANK1A0A1B0GTG1 560 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 A0A1W2PPM1 405 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 C2orf81A6NN90 581 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 KAT7O95251 611 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PGLSO95336 258 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 POP4O95707 220 aaKnown RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 C1QAP02745 245 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ASGR2P07307 311 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SAT1P21673 171 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ATP5DP30049 168 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 OPRD1P41143 372 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 WASP42768 502 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 CTBP1Q13363 440 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 HTR4Q13639 388 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 QPCTQ16769 361 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ARSIQ5FYB1 569 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 TSTD2Q5T7W7 516 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 EMC10Q5UCC4 262 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ADGRD1Q6QNK2 874 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 TAOK1Q7L7X3 1001 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 STRA8Q7Z7C7 330 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 EXOC3L1Q86VI1 746 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 CACUL1Q86Y37 369 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 DENND6AQ8IWF6 608 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 DEFB123Q8N688 67 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.73□□□□□ -1.81
RTN4-208ENST00000404909 KIAA1958Q8N8K9 716 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MDGA1Q8NFP4 955 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 OR2A12Q8NGT7 310 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MDM1Q8TC05 714 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MGARPQ8TDB4 240 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 BRSK1Q8TDC3 778 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 WFIKKN2Q8TEU8 576 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PTPRN2Q92932 1015 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms