RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CDKL3Q8IVW4 592 aaPredicted RBP20.05■□□□□ 0.8
SNCA-203ENST00000394986 ZNF567Q8N184 647 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 C12orf50Q8NA57 414 aaPredicted RBP20.05■□□□□ 0.8
SNCA-203ENST00000394986 SPATA22Q8NHS9 363 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 ATG4AQ8WYN0 398 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 FEM1CQ96JP0 617 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 TEKT5Q96M29 485 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 SMIM14Q96QK8 99 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 TDRD1Q9BXT4 1180 aaKnown RBP20.05■□□□□ 0.8
SNCA-203ENST00000394986 GLOD4Q9HC38 313 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 CAPN10Q9HC96 672 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 LNP1A1A4G5 178 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 A8MX80 341 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 FZD6O60353 706 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 SERPINF2P08697 491 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 NFKB1P19838 968 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 MMP12P39900 470 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 CSNK1EP49674 416 aaKnown RBP20.04■□□□□ 0.8
SNCA-203ENST00000394986 RPS21P63220 83 aaKnown RBP20.04■□□□□ 0.8
SNCA-203ENST00000394986 AASDHQ4L235 1098 aaPredicted RBP20.04■□□□□ 0.8
SNCA-203ENST00000394986 SETMARQ53H47 684 aaPredicted RBP20.04■□□□□ 0.8
SNCA-203ENST00000394986 ERAP2Q6P179 960 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 DARS2Q6PI48 645 aaKnown RBP20.04■□□□□ 0.8
SNCA-203ENST00000394986 CEP76Q8TAP6 659 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 CXorf40AQ8TE69 158 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 UBE2Q2Q8WVN8 375 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 IMP4Q96G21 291 aaKnown RBP20.04■□□□□ 0.8
SNCA-203ENST00000394986 AASDHPPTQ9NRN7 309 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 KLHL8Q9P2G9 620 aaPredicted RBP20.04■□□□□ 0.8
SNCA-203ENST00000394986 SLC6A14Q9UN76 642 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 CHKBQ9Y259 395 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 COQ6Q9Y2Z9 468 aa20.04■□□□□ 0.8
SNCA-203ENST00000394986 A0A1B0GVT2 93 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 KCNN4O15554 427 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 MTSS1O43312 755 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 KIF5CO60282 957 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 WNT1P04628 370 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 ATP1A1P05023 1023 aaKnown RBP20.03■□□□□ 0.8
SNCA-203ENST00000394986 CTPS1P17812 591 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 CES1P23141 567 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 ELP6Q0PNE2 266 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 TMEM52BQ4KMG9 183 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 NAPEPLDQ6IQ20 393 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 RABEPKQ7Z6M1 372 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 C17orf53Q8N3J3 647 aaPredicted RBP20.03■□□□□ 0.8
SNCA-203ENST00000394986 TTC13Q8NBP0 860 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 OR2I1PQ8NGU4 316 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 NUSAP1Q9BXS6 441 aaKnown RBP20.03■□□□□ 0.8
SNCA-203ENST00000394986 SLC17A9Q9BYT1 436 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 SLC25A51Q9H1U9 297 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 UBP1Q9NZI7 540 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 JRKLQ9Y4A0 524 aa20.03■□□□□ 0.8
SNCA-203ENST00000394986 A0A0U1RQS6 177 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 H0Y8X5 98 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 RAD51BO15315 384 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 PAK4O96013 591 aaPredicted RBP20.02■□□□□ 0.8
SNCA-203ENST00000394986 MT-CYBP00156 380 aaPredicted RBP20.02■□□□□ 0.8
SNCA-203ENST00000394986 PRLP01236 227 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 ALPIP09923 528 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 ENGP17813 658 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 SUOXP51687 545 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 AFF3P51826 1226 aaKnown RBP20.02■□□□□ 0.8
SNCA-203ENST00000394986 POLR2LP62875 67 aaKnown RBP20.02■□□□□ 0.8
SNCA-203ENST00000394986 RACK1P63244 317 aaKnown RBP20.02■□□□□ 0.8
SNCA-203ENST00000394986 BNC1Q01954 994 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 RALGDSQ12967 914 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 PCSK7Q16549 785 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 KDM7AQ6ZMT4 941 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 PID1Q7Z2X4 250 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 KDELC2Q7Z4H8 507 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 LPCAT1Q8NF37 534 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 PIH1D2Q8WWB5 315 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 C1orf54Q8WWF1 131 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 EDEM2Q9BV94 578 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 B4GALT6Q9UBX8 382 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 DNPEPQ9ULA0 475 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 TPX2Q9ULW0 747 aaKnown RBP20.02■□□□□ 0.8
SNCA-203ENST00000394986 PHTF1Q9UMS5 762 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 DMTF1Q9Y222 760 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 PTPRZ1P23471 2315 aaPredicted RBP20.02■□□□□ 0.8
SNCA-203ENST00000394986 PLXNA2O75051 1894 aa20.02■□□□□ 0.8
SNCA-203ENST00000394986 GOLGA8CPA6NN73 597 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 CEP104O60308 925 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 C6P13671 934 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 LIG3P49916 1009 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 CLDN2P57739 230 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 GRIK2Q13002 908 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 DPPA4Q7L190 304 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 GPR161Q8N6U8 529 aaKnown RBP20.02■□□□□ 0.79
SNCA-203ENST00000394986 SLC35B2Q8TB61 432 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 SPOCK2Q92563 424 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 GTPBP2Q9BX10 602 aaKnown RBP20.02■□□□□ 0.79
SNCA-203ENST00000394986 C1QTNF2Q9BXJ5 285 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 USP29Q9HBJ7 922 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 PCDH9Q9HC56 1237 aa20.02■□□□□ 0.79
SNCA-203ENST00000394986 A0A1W2PR77 199 aa20.01■□□□□ 0.79
SNCA-203ENST00000394986 NPIPB15A6NHN6 443 aaPredicted RBP20.01■□□□□ 0.79
SNCA-203ENST00000394986 PRR5-ARHGAP8B1AHC4 643 aa20.01■□□□□ 0.79
SNCA-203ENST00000394986 PRAMEF26H0Y7S4 382 aa20.01■□□□□ 0.79
SNCA-203ENST00000394986 FGGP02679 453 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms