RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SOX3P41225 446 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 HALP42357 657 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 MMP14P50281 582 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 KIR2DS3Q14952 304 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZC2HC1CQ53FD0 456 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 TECRLQ5HYJ1 363 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 LAS2Q8IYD9 372 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZNF611Q8N823 705 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZSWIM2Q8NEG5 633 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 LMBR1Q8WVP7 490 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 TMIGD2Q96BF3 282 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 MPP4Q96JB8 637 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZNF582Q96NG8 517 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 KLF6Q99612 283 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 NPAS1Q99742 590 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 MMTAG2Q9BU76 263 aaKnown RBP-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 POLR3CQ9BUI4 534 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 WDCPQ9H6R7 721 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 MAGEE1Q9HCI5 957 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZNF586Q9NXT0 402 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 THYN1Q9P016 225 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 SLCO3A1Q9UIG8 710 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 KCNJ14Q9UNX9 436 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 MSRB2Q9Y3D2 182 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 MTORP42345 2549 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 TLN1Q9Y490 2541 aaKnown RBP-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 FAM186AA6NE01 2351 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 TEX15Q9BXT5 2789 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 TACC2O95359 2948 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 WNK2Q9Y3S1 2297 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 ITPR1Q14643 2758 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 IGLV5-45A0A087WSX0 123 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 CPED1A4D0V7 1026 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 AIREO43918 545 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 SYNCRIPO60506 623 aaKnown RBP-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 FAM157CP0CG43 387 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 THRBP10828 461 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 ERCC3P19447 782 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 KLRC2P26717 231 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 WNT5AP41221 380 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 MTNR1BP49286 362 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 CRISP1P54107 249 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 SCAND1P57086 179 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 HERV-K104P61576 105 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 ADORA2A-AS1P86434 159 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 GAGE5Q13069 117 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 GAGE6Q13070 117 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 ATP13A4Q4VNC1 1196 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 IGFL1Q6UW32 110 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 CLEC9AQ6UXN8 241 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 Q6ZSR9 355 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 PATL1Q86TB9 770 aaKnown RBP-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 TTC7BQ86TV6 843 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 TMEM219Q86XT9 240 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 AADATQ8N5Z0 425 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 MIPOL1Q8TD10 442 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 TNIP3Q96KP6 325 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 RAD21L1Q9H4I0 556 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 TMEM51Q9NW97 253 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 RPS6KB2Q9UBS0 482 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 RAB26Q9ULW5 256 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 PCDHA3Q9Y5H8 950 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 MAGED1Q9Y5V3 778 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 CDY1Q9Y6F8 540 aa-0.63□□□□□ -2.51
RNU6-540P-201ENST00000384622 KIAA1210Q9ULL0 1709 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 APC2O95996 2303 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 DMXL2Q8TDJ6 3036 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 FAT2Q9NYQ8 4349 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 A0A087WW49 117 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 A0A087WWV3 80 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 FAM168BA1KXE4 195 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 MEX3AA1L020 520 aaKnown RBP-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 HSPB6O14558 160 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 KIF3BO15066 747 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 HNRNPRO43390 633 aaKnown RBP-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 SNX2O60749 519 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 CNTN5O94779 1100 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 EML2O95834 649 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 CKMT1AP12532 417 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 UNGP13051 313 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 DPP6P42658 865 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 MAPK9P45984 424 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 SLC11A2P49281 568 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 ARHGAP8P85298 464 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 SF3A1Q15459 793 aaKnown RBP-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 ELF2Q15723 593 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 GFRALQ6UXV0 394 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 TSPAN33Q86UF1 283 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 SLC25A42Q86VD7 318 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 PPP1R3BQ86XI6 285 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 C17orf53Q8N3J3 647 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 SLC15A4Q8N697 577 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 MRAPQ8TCY5 172 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 NSUN6Q8TEA1 469 aaKnown RBP-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 CREB3L4Q8TEY5 395 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 AENQ8WTP8 325 aaKnown RBP-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 RAPGEF4Q8WZA2 1011 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 IP6K1Q92551 441 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 MKL1Q969V6 931 aa-0.64□□□□□ -2.51
RNU6-540P-201ENST00000384622 LRFN5Q96NI6 719 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms