RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 MUC22E2RYF6 1773 aaPredicted RBP12.39□□□□□ -0.43
TUBE1-202ENST00000368662 CRTAMO95727 393 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 UGT2B4P06133 528 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 EPHX1P07099 455 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 PDHA1P08559 390 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 GPX6P59796 221 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 CRADDP78560 199 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 PDE1BQ01064 536 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 IFFO1Q0D2I5 559 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 SPANXN3Q5MJ09 141 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 C9orf64Q5T6V5 341 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 PKN3Q6P5Z2 889 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF449Q6P9G9 518 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 UNC5AQ6ZN44 842 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 CROCCP2Q86T23 111 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 CHST14Q8NCH0 376 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 TMIEQ8NEW7 156 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 FAM3CQ92520 227 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 CFAP36Q96G28 342 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 TRABDQ9H4I3 376 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 PLAAQ9Y263 795 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 TCAF1Q9Y4C2 921 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 STON1Q9Y6Q2 735 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 RPS6KL1Q9Y6S9 549 aa12.39□□□□□ -0.43
TUBE1-202ENST00000368662 LEFTY1O75610 366 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 PAPSS2O95340 614 aaPredicted RBP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 IVLP07476 585 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 PAMP19021 973 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 SSTR1P30872 391 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 GKP32189 559 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 PRKCQQ04759 706 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 MSLNQ13421 630 aaPredicted RBP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 FRG1Q14331 258 aaKnown RBP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 STAT4Q14765 748 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 CRYMQ14894 314 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 QPCTQ16769 361 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 FSTL4Q6MZW2 842 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF366Q8N895 744 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 GRIN3AQ8TCU5 1115 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 BLOC1S5Q8TDH9 187 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 PIH1D2Q8WWB5 315 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 PPCSQ9HAB8 311 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 MAGEE1Q9HCI5 957 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 CHRAC1Q9NRG0 131 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 CACNA2D2Q9NY47 1150 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 HCN2Q9UL51 889 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 A0A0J9YYE9 177 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 C2orf81A6NN90 581 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 SIN3BO75182 1162 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 ALDH1A2O94788 518 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 EGFP01133 1207 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 TRBC1P01850 177 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 HLA-EP13747 358 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 NTSR1P30989 418 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 MRPS21P82921 87 aaKnown RBP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 SEPT6Q14141 434 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 MLF2Q15773 248 aaPredicted RBP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 KLHL38Q2WGJ6 581 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 HSF5Q4G112 596 aaPredicted RBP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF852Q6ZMS4 543 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 CAPN12Q6ZSI9 719 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 TPRG1Q6ZUI0 275 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 USP45Q70EL2 814 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 EZH1Q92800 747 aaPredicted RBP12.38□□□□□ -0.43
TUBE1-202ENST00000368662 VOPP1Q96AW1 172 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 PPP1R16AQ96I34 528 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 ZIM3Q96PE6 472 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 LYSMD1Q96S90 227 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 CYTH2Q99418 400 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 FBRSQ9HAH7 460 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 DKK3Q9UBP4 350 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 RIMKLBQ9ULI2 386 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 PPIL1Q9Y3C6 166 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 FAM169AQ9Y6X4 670 aa12.38□□□□□ -0.43
TUBE1-202ENST00000368662 TCRBV9S1A1TA0A576 114 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 TSPAN11A1L157 253 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 MROH6A6NGR9 719 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 SYNCRIPO60506 623 aaKnown RBP12.37□□□□□ -0.43
TUBE1-202ENST00000368662 PRKCHP24723 683 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 TIE1P35590 1138 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 SEC13P55735 322 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 STARD3Q14849 445 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 TAF1AQ15573 450 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-202ENST00000368662 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF805Q5CZA5 627 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 EMC10Q5UCC4 262 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 FBF1Q8TES7 1133 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 CDKL2Q92772 493 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 KLHL32Q96NJ5 620 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 GABRG3Q99928 467 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 C19orf43Q9BQ61 176 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 ROPN1BQ9BZX4 212 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms