RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 SPPL2BQ8TCT7 592 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 UROC1Q96N76 676 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 ARNT2Q9HBZ2 717 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 PSMD13Q9UNM6 376 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 MYLKQ15746 1914 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 TRPC5OSA6NMA1 111 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 FLT3LGP49771 235 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 PRAMEP78395 509 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 FBXL22Q6P050 247 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 ZNF598Q86UK7 904 aaKnown RBP18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 CILP2Q8IUL8 1156 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 SPDYE1Q8NFV5 336 aaPredicted RBP18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 PPP1R2P1Q96PQ5 205 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 COPS7BQ9H9Q2 264 aaPredicted RBP18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 ADA2Q9NZK5 511 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 SCML2Q9UQR0 700 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 ADAMTS4O75173 837 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 PIRTP0C851 137 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 SIRPB2Q5JXA9 342 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 KIAA0408Q6ZU52 694 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 SETD3Q86TU7 594 aaPredicted RBP18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 CUZD1Q86UP6 607 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 LRRC49Q8IUZ0 686 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 PGBD5Q8N414 524 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 CALML6Q8TD86 181 aa18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.2■□□□□ 0.5
UBQLN4-201ENST00000368309 ATP6AP2A0A1C7CYW4 349 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 ATP6AP2O75787 350 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 KPNA2P52292 529 aaKnown RBP18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 DNAJB13P59910 316 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 CLEC6AQ6EIG7 209 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 ZNF683Q8IZ20 524 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 RYBPQ8N488 228 aaPredicted RBP18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 ICA1LQ8NDH6 482 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 EXT2Q93063 718 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 MAELQ96JY0 434 aaKnown RBP18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 TRPC7Q9HCX4 862 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 PRDM5Q9NQX1 630 aaPredicted RBP18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 CCDC167Q9P0B6 97 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 SLC27A5Q9Y2P5 690 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 DTNAQ9Y4J8 743 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 RHOQP17081 205 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 ME2P23368 584 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 PFKPQ01813 784 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 FOLH1Q04609 750 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 KLC3Q6P597 504 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 GLB1LQ6UWU2 654 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 OR52K2Q8NGK3 314 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 TBATAQ96M53 351 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 ATP13A1Q9HD20 1204 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 SEPT4O43236 478 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 POLE2P56282 527 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 FBXL19Q6PCT2 694 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 KLHDC9Q8NEP7 349 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 ZCWPW1Q9H0M4 648 aa18.19■□□□□ 0.5
UBQLN4-201ENST00000368309 WASH4PA8MWX3 477 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 CASQ2O14958 399 aaPredicted RBP18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 CCND3P30281 292 aaPredicted RBP18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 ADSLP30566 484 aaPredicted RBP18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 ACVRL1P37023 503 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 CLCN5P51795 746 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 NDST2P52849 883 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 MYEOVQ96EZ4 313 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 SLC22A2O15244 555 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 TADA2AO75478 443 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 SUPT7LO94864 414 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 S1PR4O95977 384 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 CDH13P55290 713 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 CLLU1OSQ5K130 101 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 APLFQ8IW19 511 aaPredicted RBP18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 UBXN10Q96LJ8 280 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 LRGUKQ96M69 825 aa18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 RPRD1AQ96P16 312 aaPredicted RBP18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 TDRD15B5MCY1 1934 aaKnown RBP18.18■□□□□ 0.5
UBQLN4-201ENST00000368309 UBFD1O14562 309 aaKnown RBP18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 AGKQ53H12 422 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 OGFRL1Q5TC84 451 aaPredicted RBP18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 SPATA24Q86W54 205 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 DCP1BQ8IZD4 617 aaKnown RBP18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 HMGCLL1Q8TB92 370 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 MRPL1Q9BYD6 325 aaKnown RBP18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 UPF3AQ9H1J1 476 aaKnown RBP18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 TMEM248Q9NWD8 314 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 ARL5AQ9Y689 179 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 ARHGEF37A1IGU5 675 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 GPC4O75487 556 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 TRPA1O75762 1119 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 SLC2A3P11169 496 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 YWHAQP27348 245 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 NRG1Q02297 640 aaPredicted RBP18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 POLD3Q15054 466 aaPredicted RBP18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 C10orf120Q5SQS8 335 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 MAP3K21Q5TCX8 1036 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 LILRA2Q8N149 483 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 ARRDC2Q8TBH0 407 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 ZNF483Q8TF39 744 aaPredicted RBP18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 SEMA3CQ99985 751 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 VPS45Q9NRW7 570 aa18.17■□□□□ 0.5
UBQLN4-201ENST00000368309 UBDO15205 165 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms