RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CCSER2Q9H7U1 834 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 PNPOQ9NVS9 261 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 STOML1Q9UBI4 398 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 SLC2A6Q9UGQ3 507 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 SEPT3Q9UH03 358 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 ARIH1Q9Y4X5 557 aaPredicted RBP14.11□□□□□ -0.15
USF1-202ENST00000368020 CCDC78A2IDD5 438 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 PRR5-ARHGAP8B1AHC4 643 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 TARM1B6A8C7 271 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 TK2O00142 265 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SOAT2O75908 522 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 TM7SF2O76062 418 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 PENKP01210 267 aaPredicted RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 HMBSP08397 361 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 LINC00271P0C7V0 271 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SAT1P21673 171 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 ATP5F1P24539 256 aaPredicted RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 BMP8BP34820 402 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 CHRNA4P43681 627 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 GRIA4P48058 902 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 ARHGAP8P85298 464 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 GNA12Q03113 381 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 KDSRQ06136 332 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SIRPB2Q5JXA9 342 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SPOUT1Q5T280 376 aaKnown RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 NADSYN1Q6IA69 706 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 KIAA1841Q6NSI8 718 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 MRNIPQ6NTE8 343 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 RSPO2Q6UXX9 243 aaPredicted RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 ACAD11Q709F0 780 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SETD3Q86TU7 594 aaPredicted RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 CILP2Q8IUL8 1156 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SCUBE1Q8IWY4 988 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 RBM15BQ8NDT2 890 aaKnown RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 MYRFLQ96LU7 910 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 KLHL5Q96PQ7 755 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SEMA3CQ99985 751 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 CRISPLD1Q9H336 500 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 ATXN3LQ9H3M9 355 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 COG4Q9H9E3 785 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 PDFQ9HBH1 243 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SPG21Q9NZD8 308 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 CPSF2Q9P2I0 782 aaKnown RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 XPR1Q9UBH6 696 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 MAFFQ9ULX9 164 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 RWDD3Q9Y3V2 267 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 L3MBTL1Q9Y468 752 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 E2F8A0AVK6 867 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 TRPC5OSA6NMA1 111 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 MATN2O00339 956 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 LATS1O95835 1130 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 LTA4HP09960 611 aaKnown RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 TPBGLP0DKB5 382 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 ABCG1P45844 678 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 MAXP61244 160 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 NSUN2Q08J23 767 aaKnown RBP eCLIP14.1□□□□□ -0.15
USF1-202ENST00000368020 MSLNQ13421 630 aaPredicted RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 VEPH1Q14D04 833 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 FAM45BPQ6NSW5 357 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 ZNF783Q6ZMS7 281 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 SLC22A9Q8IVM8 553 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 GPR65Q8IYL9 337 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 TMEM151AQ8N4L1 468 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 ZNF781Q8N8C0 355 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 OR13J1Q8NGT2 312 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 GPR150Q8NGU9 434 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 FAM45AQ8TCE6 357 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 BRSK1Q8TDC3 778 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 GIPC2Q8TF65 315 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 TRMT2BQ96GJ1 504 aaKnown RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 TMEM169Q96HH4 297 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 CNDP1Q96KN2 507 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 MGME1Q9BQP7 344 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 CCDC28BQ9BUN5 200 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 POPDC3Q9HBV1 291 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 EML4Q9HC35 981 aaKnown RBP14.1□□□□□ -0.15
USF1-202ENST00000368020 TCF7L2Q9NQB0 619 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 TRPM5Q9NZQ8 1165 aa14.1□□□□□ -0.15
USF1-202ENST00000368020 ILVBLA1L0T0 632 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.09□□□□□ -0.15
USF1-202ENST00000368020 NT5C1B-RDH14C9J2C7 533 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 CRTAMO95727 393 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 NDST3O95803 873 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 ATXN1LP0C7T5 689 aaKnown RBP14.09□□□□□ -0.15
USF1-202ENST00000368020 OGNP20774 298 aaKnown RBP14.09□□□□□ -0.15
USF1-202ENST00000368020 GCKP35557 465 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 NUMBP49757 651 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 TAS2R39P59534 338 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 GALNT1Q10472 559 aaPredicted RBP14.09□□□□□ -0.15
USF1-202ENST00000368020 ACAP2Q15057 778 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 PRSS55Q6UWB4 352 aaPredicted RBP14.09□□□□□ -0.15
USF1-202ENST00000368020 NAPRTQ6XQN6 538 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 TMC7Q7Z402 723 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 MAVSQ7Z434 540 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 KDELC2Q7Z4H8 507 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 TMEM173Q86WV6 379 aaPredicted RBP14.09□□□□□ -0.15
USF1-202ENST00000368020 CEP97Q8IW35 865 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.09□□□□□ -0.15
USF1-202ENST00000368020 ACVR1CQ8NER5 493 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 GPR78Q96P69 363 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms