RNA–Protein interactions for RNA: ENST00000366259.2

LINC00449-201, long intergenic non-protein coding RNA 449, humanhuman

TSL 2 BASIC

Gene LINC00449, Length 872 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00449-201ENST00000366259 DKK3Q9UBP4 350 aa12.5□□□□□ -0.41
LINC00449-201ENST00000366259 LHX3Q9UBR4 397 aa12.5□□□□□ -0.41
LINC00449-201ENST00000366259 ATXN7L1Q9ULK2 861 aaPredicted RBP12.5□□□□□ -0.41
LINC00449-201ENST00000366259 MFHAS1Q9Y4C4 1052 aa12.5□□□□□ -0.41
LINC00449-201ENST00000366259 SDK2Q58EX2 2172 aa12.5□□□□□ -0.41
LINC00449-201ENST00000366259 DOPEY2Q9Y3R5 2298 aa12.5□□□□□ -0.41
LINC00449-201ENST00000366259 NBASA2RRP1 2371 aa12.5□□□□□ -0.41
LINC00449-201ENST00000366259 ZSCAN5CA6NGD5 496 aaPredicted RBP12.49□□□□□ -0.41
LINC00449-201ENST00000366259 TOR1BO14657 336 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 EPHB6O15197 1021 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 CREB3O43889 395 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 BUB1BO60566 1050 aaPredicted RBP12.49□□□□□ -0.41
LINC00449-201ENST00000366259 RASGRP1O95267 797 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 PCCBP05166 539 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 ALPIP09923 528 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 KRT3P12035 628 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 UNGP13051 313 aaPredicted RBP12.49□□□□□ -0.41
LINC00449-201ENST00000366259 ITIH1P19827 911 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
LINC00449-201ENST00000366259 LIG3P49916 1009 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 BLKP51451 505 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 INHBCP55103 352 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 POLR2FP61218 127 aaKnown RBP12.49□□□□□ -0.41
LINC00449-201ENST00000366259 NFATC3Q12968 1075 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 SERINC3Q13530 473 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 NFATC4Q14934 902 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 LINC00303Q3SY05 128 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 INO80DQ53TQ3 878 aaPredicted RBP12.49□□□□□ -0.41
LINC00449-201ENST00000366259 TCP11X2Q5H9J9 407 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 SCYL2Q6P3W7 929 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 SLFN11Q7Z7L1 901 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 ZSWIM9Q86XI8 627 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 ZNF677Q86XU0 584 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 PLA2G15Q8NCC3 412 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 SCG3Q8WXD2 468 aaKnown RBP12.49□□□□□ -0.41
LINC00449-201ENST00000366259 NTAN1Q96AB6 310 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 FUBP1Q96AE4 644 aaKnown RBP12.49□□□□□ -0.41
LINC00449-201ENST00000366259 PDXPQ96GD0 296 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 NCAPGQ9BPX3 1015 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 VPS16Q9H269 839 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 LRRN3Q9H3W5 708 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 CLSTN2Q9H4D0 955 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 SUV39H2Q9H5I1 410 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 CLMPQ9H6B4 373 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 KLQ9UEF7 1012 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 DAAM1Q9Y4D1 1078 aa12.49□□□□□ -0.41
LINC00449-201ENST00000366259 TMEM202A6NGA9 273 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 TMEM110-MUSTN1A8MSY1 372 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 J3KR12 359 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 CCP110O43303 1012 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 GPD1P21695 349 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 ERCC5P28715 1186 aaPredicted RBP12.48□□□□□ -0.41
LINC00449-201ENST00000366259 SOX5P35711 763 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 ETV5P41161 510 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 RGRP47804 291 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 JAM2P57087 298 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 NFKB2Q00653 900 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 KCNC4Q03721 635 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 ELP6Q0PNE2 266 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 UGP2Q16851 508 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 PRICKLE2Q7Z3G6 844 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 TMPRSS9Q7Z410 1059 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 CASKIN2Q8WXE0 1202 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 OR1E3Q8WZA6 343 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 EXTL1Q92935 676 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 SELENOOQ9BVL4 669 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 TRIM4Q9C037 500 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 STRADBQ9C0K7 418 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 MRPL40Q9NQ50 206 aaKnown RBP12.48□□□□□ -0.41
LINC00449-201ENST00000366259 FAM207AQ9NSI2 230 aaPredicted RBP12.48□□□□□ -0.41
LINC00449-201ENST00000366259 ADAM22Q9P0K1 906 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 PISDQ9UG56 409 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 PCDHGA7Q9Y5G6 932 aa12.48□□□□□ -0.41
LINC00449-201ENST00000366259 ZFC3H1O60293 1989 aaKnown RBP12.48□□□□□ -0.41
LINC00449-201ENST00000366259 TSPAN11A1L157 253 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 TNFP01375 233 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 HTR1BP28222 390 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 MMP12P39900 470 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 YBEYP58557 167 aaPredicted RBP12.47□□□□□ -0.41
LINC00449-201ENST00000366259 EFHC2Q5JST6 749 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 USP53Q70EK8 1073 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 VASH2Q86V25 355 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 DNAAF5Q86Y56 855 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 CCNJLQ8IV13 435 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 FAM46DQ8NEK8 389 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 GPR156Q8NFN8 814 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 CCL4L1Q8NHW4 92 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 CELF6Q96J87 481 aaKnown RBP12.47□□□□□ -0.41
LINC00449-201ENST00000366259 WDR92Q96MX6 357 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 RBM15Q96T37 977 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC00449-201ENST00000366259 FGF22Q9HCT0 170 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 GPATCH2LQ9NWQ4 482 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 UBA2Q9UBT2 640 aaPredicted RBP12.47□□□□□ -0.41
LINC00449-201ENST00000366259 FZD10Q9ULW2 581 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 LOXL2Q9Y4K0 774 aa12.47□□□□□ -0.41
LINC00449-201ENST00000366259 SPENQ96T58 3664 aaKnown RBP12.47□□□□□ -0.41
LINC00449-201ENST00000366259 PRAMEF33A0A0G2JMD5 474 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms