RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 BICRALQ6AI39 1079 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 FAAH2Q6GMR7 532 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 ERICH5Q6P6B1 374 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CES3Q6UWW8 571 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CHST15Q7LFX5 561 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 PHF13Q86YI8 300 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 FBXW8Q8N3Y1 598 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SFRP1Q8N474 314 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 ZNF540Q8NDQ6 660 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CKAP2Q8WWK9 683 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 DCUN1D5Q9BTE7 237 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 TRMOQ9BU70 441 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 OSBPL11Q9BXB4 747 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 DGCR6LQ9BY27 220 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SENP6Q9GZR1 1112 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 SEMA6AQ9H2E6 1030 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 ZNF304Q9HCX3 659 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 VPS45Q9NRW7 570 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 MAT2BQ9NZL9 334 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 NUDT5Q9UKK9 219 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PRPF19Q9UMS4 504 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 SAMD4AQ9UPU9 718 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 RBM7Q9Y580 266 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 ARHGAP23Q9P227 1491 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 FAM86C2PA6NEL3 165 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 GABRB2P47870 512 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 GRIA4P48058 902 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SCNN1GP51170 649 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 CRYBB1P53674 252 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 TAS2R41P59536 307 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 VBP1P61758 197 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 RPL38P63173 70 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 PSMD5Q16401 504 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 MEA1Q16626 185 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 DET1Q7L5Y6 550 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ZSWIM2Q8NEG5 633 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 MAGEE2Q8TD90 523 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 PPCDCQ96CD2 204 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ZBTB10Q96DT7 871 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 MTMR8Q96EF0 704 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SLC47A1Q96FL8 570 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ELL3Q9HB65 397 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 GPN1Q9HCN4 374 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 CCDC177Q9NQR7 707 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 PNPLA3Q9NST1 481 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.49□□□□□ -1.371e-7■□□□□ 11.2
UPF2-201ENST00000356352 MTRRQ9UBK8 725 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PCDHB1Q9Y5F3 818 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ABCA9Q8IUA7 1624 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 RIC1Q4ADV7 1423 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ISM1B1AKI9 464 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SUV39H1O43463 412 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 OR10H3O60404 316 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 UGT2B11O75310 529 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SERPINA1P01009 418 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ADCYAP1R1P41586 468 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 STARP49675 285 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 NR1H2P55055 460 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ADARP55265 1226 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 GTF2BQ00403 316 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PRKG2Q13237 762 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ZC3H12AQ5D1E8 599 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 WSCD1Q658N2 575 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 JAZF1Q86VZ6 243 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 DENND1CQ8IV53 801 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 FAM98AQ8NCA5 519 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 CLP1Q92989 425 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 COX4I2Q96KJ9 171 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 RNF157Q96PX1 679 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 GAD1Q99259 594 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 CORO1BQ9BR76 489 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PRRG4Q9BZD6 226 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 MAF1Q9H063 256 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 RNF208Q9H0X6 261 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 CRISPLD1Q9H336 500 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PTPRHQ9HD43 1115 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ZDHHC4Q9NPG8 344 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 FBXO6Q9NRD1 293 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 AGO1Q9UL18 857 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 DISP2A7MBM2 1401 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 LOC100506127A0A0U1RQW1 187 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 UGT2B17O75795 530 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SEC24AO95486 1093 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SERPINA6P08185 405 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 GIMD1P0DJR0 217 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 NR2F6P10588 404 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 RPL22P35268 128 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 ABL2P42684 1182 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PDX1P52945 283 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TAF5Q15542 800 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 HKDC1Q2TB90 917 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ATXN7L2Q5T6C5 722 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 AAGABQ6PD74 315 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 POTEHQ6S545 545 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 HIPK1Q86Z02 1210 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PHYKPLQ8IUZ5 450 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 POU5F2Q8N7G0 328 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 OR4L1Q8NH43 312 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 CDADC1Q9BWV3 514 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SLC4A5Q9BY07 1137 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms