RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 PRNPP04156 253 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 SLC8A1P32418 973 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 GRIA4P48058 902 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 CASP8Q14790 479 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 CFAP58Q5T655 872 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 UBAP2Q5T6F2 1119 aaKnown RBP20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 TRMT11Q7Z4G4 463 aaKnown RBP20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 ZSWIM9Q86XI8 627 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 IL17RCQ8NAC3 791 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 CFAP36Q96G28 342 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 FAM129BQ96TA1 746 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 PHTF1Q9UMS5 762 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 NDRG2Q9UN36 371 aaKnown RBP20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 SOX13Q9UN79 622 aa20.24■□□□□ 0.83
SIGMAR1-202ENST00000353468 PRKCGP05129 697 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 PGAM1P18669 254 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 ADRA1DP25100 572 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 SSTR1P30872 391 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 GPX6P59796 221 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 CCINQ13939 588 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 SLC29A2Q14542 456 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 CAPN12Q6ZSI9 719 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 C3orf62Q6ZUJ4 267 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 HDXQ7Z353 690 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 TMIEQ8NEW7 156 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 PPHLN1Q8NEY8 458 aaKnown RBP20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 BLOC1S5Q8TDH9 187 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 SPOCK2Q92563 424 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 RANBP9Q96S59 729 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 KIFC1Q9BW19 673 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 VPS37BQ9H9H4 285 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 CHRAC1Q9NRG0 131 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 FBXL21Q9UKT6 434 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 PPM1HQ9ULR3 514 aa20.23■□□□□ 0.83
SIGMAR1-202ENST00000353468 RNF40O75150 1001 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 KLF8O95600 359 aaPredicted RBP20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 PIRTP0C851 137 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 TSHRP16473 764 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 CAMK2GQ13555 558 aaPredicted RBP20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 ZNF805Q5CZA5 627 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 ARMC3Q5W041 872 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 PKN3Q6P5Z2 889 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 BRAT1Q6PJG6 821 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 DSG4Q86SJ6 1040 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 TXNDC5Q8NBS9 432 aaKnown RBP20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 BRSK1Q8TDC3 778 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 HCAR2Q8TDS4 363 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 PTCD2Q8WV60 388 aaKnown RBP20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 SMIM14Q96QK8 99 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 GABRG3Q99928 467 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 TRIM56Q9BRZ2 755 aaKnown RBP20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 SARDHQ9UL12 918 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 TCAF1Q9Y4C2 921 aa20.22■□□□□ 0.83
SIGMAR1-202ENST00000353468 FAM237BA0A1B0GVD1 139 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 HEATR9A2RTY3 570 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 SYNCRIPO60506 623 aaKnown RBP20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 CTPS1P17812 591 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 POLR2LP62875 67 aaKnown RBP20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 SEPT6Q14141 434 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 UNC5AQ6ZN44 842 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 TMEM135Q86UB9 458 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 UBALD2Q8IYN6 164 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 NDUFAF2Q8N183 169 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 PIP4K2CQ8TBX8 421 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 SHDQ96IW2 340 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 FUT8Q9BYC5 575 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 PLAC1Q9HBJ0 212 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 MRM3Q9HC36 420 aaKnown RBP20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 ZNF446Q9NWS9 450 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 DKK3Q9UBP4 350 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 PPIL1Q9Y3C6 166 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 SPO11Q9Y5K1 396 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 RPS6KL1Q9Y6S9 549 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 A0A0J9YYE9 177 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 TSPAN11A1L157 253 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 KRBA1A5PL33 1030 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 KPNA3O00505 521 aaPredicted RBP20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 ADAM23O75077 832 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 SPAG6O75602 509 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 USP1O94782 785 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 TRBC1P01850 177 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 POLBP06746 335 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 GSTA2P09210 222 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 STARD6P59095 220 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 HSF5Q4G112 596 aaPredicted RBP20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 STEAP4Q687X5 459 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 CES3Q6UWW8 571 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 GJD3Q8N144 294 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 RPLP0P6Q8NHW5 317 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 UHMK1Q8TAS1 419 aaKnown RBP20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 ERLEC1Q96DZ1 483 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 MAGEE1Q9HCI5 957 aa20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.21■□□□□ 0.838e-8■■■□□ 14.7
SIGMAR1-202ENST00000353468 MRPS17Q9Y2R5 130 aaKnown RBP20.21■□□□□ 0.83
SIGMAR1-202ENST00000353468 CKAP5Q14008 2032 aa20.2■□□□□ 0.82
SIGMAR1-202ENST00000353468 IL1BP01584 269 aa20.2■□□□□ 0.82
SIGMAR1-202ENST00000353468 ABHD2P08910 425 aa20.2■□□□□ 0.82
SIGMAR1-202ENST00000353468 ALPIP09923 528 aa20.2■□□□□ 0.82
SIGMAR1-202ENST00000353468 NMBRP28336 390 aa20.2■□□□□ 0.82
SIGMAR1-202ENST00000353468 PHBP35232 272 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms