RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 USP25Q9UHP3 1055 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 KCNG1Q9UIX4 513 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 STOML2Q9UJZ1 356 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 KIF3AQ9Y496 699 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 ATP8B3O60423 1300 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 HHLA1C9JL84 531 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 C1QTNF3-AMACRE9PGA6 284 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-201ENST00000340660 H0YCG3 227 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 H3BRJ5 948 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 M0QYT0 321 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 FPGTO14772 594 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 ALPIP09923 528 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 CD1CP29017 333 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 ZNF445P59923 1031 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 MC2RQ01718 297 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 PPARDQ03181 441 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 HDAC1Q13547 482 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-201ENST00000340660 ANO6Q4KMQ2 910 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 FSCBQ5H9T9 825 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 OGFOD3Q6PK18 319 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 CEACAM20Q6UY09 585 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 MFN1Q8IWA4 741 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 FIBINQ8TAL6 211 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 UBASH3BQ8TF42 649 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 KCTD13Q8WZ19 329 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 TIPINQ9BVW5 301 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 EDEM3Q9BZQ6 932 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 CSNK1G1Q9HCP0 422 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 PCDHGA6Q9Y5G7 932 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 STYXL1Q9Y6J8 313 aa11.31□□□□□ -0.6
ATXN3-201ENST00000340660 A8MXQ7 604 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 RNF103O00237 685 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 FANCGO15287 622 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 NUDT21O43809 227 aaKnown RBP11.3□□□□□ -0.6
ATXN3-201ENST00000340660 EDN3P14138 238 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 CSF2RBP32927 897 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 NUMBP49757 651 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 CSNK1G2P78368 415 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 HIST2H2BDQ6DRA6 164 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 RFWD3Q6PCD5 774 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 ZNF765Q7L2R6 523 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 SLC47A2Q86VL8 602 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 GKN2Q86XP6 184 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 CCDC117Q8IWD4 279 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-201ENST00000340660 BRSK2Q8IWQ3 736 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 WFDC11Q8NEX6 87 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 OR4D9Q8NGE8 314 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 SMAD5Q99717 465 aaKnown RBP11.3□□□□□ -0.6
ATXN3-201ENST00000340660 ZPBPQ9BS86 351 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 CEP41Q9BYV8 373 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 FGF21Q9NSA1 209 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 AKAP6Q13023 2319 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 TRPM6Q9BX84 2022 aa11.3□□□□□ -0.6
ATXN3-201ENST00000340660 FER1L5A0AVI2 2057 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 HIVEP2P31629 2446 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 NPHP3-ACAD11A0A0J9YXS1 232 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 FRMD3A2A2Y4 597 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 INAFM1C9JVW0 142 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 PDE2AO00408 941 aaPredicted RBP11.29□□□□□ -0.6
ATXN3-201ENST00000340660 CTSLP07711 333 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 RALAP11233 206 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 ZNF28P17035 718 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 ALDH4A1P30038 563 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 PDIA3P30101 505 aaKnown RBP11.29□□□□□ -0.6
ATXN3-201ENST00000340660 GLRBP48167 497 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 HK3P52790 923 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 CLPPQ16740 277 aaPredicted RBP11.29□□□□□ -0.6
ATXN3-201ENST00000340660 MPP7Q5T2T1 576 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 ADGRF1Q5T601 910 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 NKAIN2Q5VXU1 208 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 RPTNQ6XPR3 784 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 MACC1Q6ZN28 852 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 CUZD1Q86UP6 607 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 APCDD1Q8J025 514 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 THAP4Q8WY91 577 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 JAKMIP2Q96AA8 810 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 MTFMTQ96DP5 389 aaKnown RBP11.29□□□□□ -0.6
ATXN3-201ENST00000340660 FAM46AQ96IP4 442 aaKnown RBP11.29□□□□□ -0.6
ATXN3-201ENST00000340660 LENG8Q96PV6 779 aaPredicted RBP11.29□□□□□ -0.6
ATXN3-201ENST00000340660 ILKAPQ9H0C8 392 aaPredicted RBP11.29□□□□□ -0.6
ATXN3-201ENST00000340660 ENKD1Q9H0I2 346 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 CLIC5Q9NZA1 410 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 SUCOQ9UBS9 1254 aaKnown RBP11.29□□□□□ -0.6
ATXN3-201ENST00000340660 DNM3Q9UQ16 869 aa11.29□□□□□ -0.6
ATXN3-201ENST00000340660 MYH11P35749 1972 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 K7ENM7 598 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 CCDC130P13994 396 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 CTSEP14091 401 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 CASP14P31944 242 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 UGT8Q16880 541 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 TTC22Q5TAA0 569 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 RNF219Q5W0B1 726 aaPredicted RBP11.28□□□□□ -0.6
ATXN3-201ENST00000340660 ALKBH2Q6NS38 261 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 HID1Q8IV36 788 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 TSACCQ96A04 125 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms