RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DRGXA6NNA5 263 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 LACTBL1A8MY62 500 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 TNNT1P13805 278 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 GLB1P16278 677 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 MAT2AP31153 395 aaKnown RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 PLA2G4AP47712 749 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CASP4P49662 377 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 MC2RQ01718 297 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 KCNA1Q09470 495 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 ERV3-1Q14264 604 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SHEQ5VZ18 495 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 PIM3Q86V86 326 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 MMAAQ8IVH4 418 aaKnown RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 NUP93Q8N1F7 819 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CYB5D2Q8WUJ1 264 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 PLA2G12AQ9BZM1 189 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 PLK2Q9NYY3 685 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 GULP1Q9UBP9 304 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 APEX2Q9UBZ4 518 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 KCNN3Q9UGI6 736 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 APOBEC3BQ9UH17 382 aaKnown RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 IPO11Q9UI26 975 aaKnown RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 DNAI1Q9UI46 699 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 TACC2O95359 2948 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SOWAHDA6NJG2 315 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 USP27XA6NNY8 438 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SNRNP35Q16560 246 aaKnown RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SLC18A3Q16572 532 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 POM121L1PQ3SYA9 428 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CERCAMQ5T4B2 595 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 C9orf64Q5T6V5 341 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 FAM46CQ5VWP2 391 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CES4AQ5XG92 561 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 KRT39Q6A163 491 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 IGFL3Q6UXB1 125 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 ADIPOR2Q86V24 386 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF677Q86XU0 584 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CCDC117Q8IWD4 279 aaPredicted RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 FAM217AQ8IXS0 508 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 TOP6BLQ8N6T0 577 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 ACRBPQ8NEB7 543 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CCDC74BQ96LY2 380 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 AMBRA1Q9C0C7 1298 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CCSER2Q9H7U1 834 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 VRTNQ9H8Y1 702 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SEMA3GQ9NS98 782 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 NTNG1Q9Y2I2 539 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 C2CD2Q9Y426 696 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 FAM92AA1XBS5 289 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 LRRC53A6NM62 1247 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 TOR1BO14657 336 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 EPHB6O15197 1021 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SLC16A4O15374 487 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 YY2O15391 372 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SRPRAP08240 638 aaKnown RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CCDC15Q0P6D6 951 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 STRN3Q13033 797 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SQSTM1Q13501 440 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF284Q2VY69 593 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF542PQ5EBM4 170 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 EFHC1Q5JVL4 640 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 LYPLAL1Q5VWZ2 237 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 MBLAC2Q68D91 279 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CRELD2Q6UXH1 353 aaPredicted RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 TMEM200AQ86VY9 491 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 HORMAD1Q86X24 394 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 BRSK2Q8IWQ3 736 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 PHACTR4Q8IZ21 702 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 SYCP3Q8IZU3 236 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF366Q8N895 744 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 CGRRF1Q99675 332 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 FBXO8Q9NRD0 319 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 MRPS18BQ9Y676 258 aaKnown RBP6.74□□□□□ -1.33
CSTF3-201ENST00000323959 MEGF8Q7Z7M0 2845 aa6.74□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF233A6NK53 670 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 C21orf140B9A014 251 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 ANKRD63C9JTQ0 380 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 F8VZ95 297 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 GABRDO14764 452 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 PHF1O43189 567 aaPredicted RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 EXOC3O60645 756 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 HUS1O60921 280 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 STK17BO94768 372 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 MTA2O94776 668 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 IL18RAPO95256 599 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 PABPC1P11940 636 aaKnown RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 POLR2EP19388 210 aaKnown RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 MZF1P28698 734 aaPredicted RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 DRD3P35462 400 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 SOX5P35711 763 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 PSEN1P49768 467 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 LIMK2P53671 638 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 EIF2B5Q13144 721 aaKnown RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 ELOCQ15369 112 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 WDR49Q8IV35 697 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 UNC5BQ8IZJ1 945 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 BMPERQ8N8U9 685 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 TM9SF4Q92544 642 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 TTC17Q96AE7 1141 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms