RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TCEAL5Q5H9L2 206 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 FSTL4Q6MZW2 842 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 LVRNQ6Q4G3 990 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 RGS9BPQ6ZS82 235 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 CDHR3Q6ZTQ4 885 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 GALNT7Q86SF2 657 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 GDAP1Q8TB36 358 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 CALML6Q8TD86 181 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 BPIFB1Q8TDL5 484 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 VOPP1Q96AW1 172 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 RMDN1Q96DB5 314 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 VPS39Q96JC1 886 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 SRPK1Q96SB4 655 aaKnown RBP16.46■□□□□ 0.23
TPM1-201ENST00000267996 GPR22Q99680 433 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 TM6SF2Q9BZW4 377 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 CEP44Q9C0F1 390 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 SLC17A7Q9P2U7 560 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 GRID1Q9ULK0 1009 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 PLLPQ9Y342 182 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 ARL5AQ9Y689 179 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 LINC01565O15544 149 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 HTRA2O43464 458 aaPredicted RBP16.45■□□□□ 0.22
TPM1-201ENST00000267996 SOCS5O75159 536 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 PGLSO95336 258 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 CRTAMO95727 393 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 FOXN2P32314 431 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 STK19P49842 368 aaPredicted RBP16.45■□□□□ 0.22
TPM1-201ENST00000267996 CSRP3P50461 194 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 ZNF140P52738 457 aaPredicted RBP16.45■□□□□ 0.22
TPM1-201ENST00000267996 RPL26P61254 145 aaKnown RBP16.45■□□□□ 0.22
TPM1-201ENST00000267996 PDE1BQ01064 536 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 TAF1AQ15573 450 aaPredicted RBP16.45■□□□□ 0.22
TPM1-201ENST00000267996 HHATQ5VTY9 493 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 DENND6AQ8IWF6 608 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 LMNTD2Q8IXW0 634 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 NDUFAF2Q8N183 169 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 LPCAT1Q8NF37 534 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 OR2AP1Q8NGE2 309 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 SPOCK2Q92563 424 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 PTPRN2Q92932 1015 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 HDAC10Q969S8 669 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 ASIC4Q96FT7 647 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 FBXO5Q9UKT4 447 aa16.45■□□□□ 0.22
TPM1-201ENST00000267996 RPL26L1Q9UNX3 145 aaKnown RBP16.45■□□□□ 0.22
TPM1-201ENST00000267996 MTO1Q9Y2Z2 717 aaKnown RBP16.45■□□□□ 0.22
TPM1-201ENST00000267996 TRAFD1O14545 582 aaPredicted RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 RPP40O75818 363 aaKnown RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 IGSF6O95976 241 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 GSRP00390 522 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 CISD3P0C7P0 127 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 PIRTP0C851 137 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 HOXB8P17481 243 aaPredicted RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 TAC1P20366 129 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 FCARP24071 287 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 SLC1A2P43004 574 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 CCT5P48643 541 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 POLD2P49005 469 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 SERPINB8P50452 374 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 VASPP50552 380 aaPredicted RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 ECT2LQ008S8 904 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 CTBP1Q13363 440 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 PDE1CQ14123 709 aaPredicted RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 PDK4Q16654 411 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 TAX1BP1Q86VP1 789 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 AHI1Q8N157 1196 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 PCDH20Q8N6Y1 951 aaKnown RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 MDGA1Q8NFP4 955 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 GABPB2Q8TAK5 448 aaPredicted RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 ZNF473Q8WTR7 871 aaKnown RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 DNAJC1Q96KC8 554 aaKnown RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 RPL10LQ96L21 214 aaKnown RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 VPS11Q9H270 941 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 C12orf65Q9H3J6 166 aaKnown RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 RABEP2Q9H5N1 569 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 SNX15Q9NRS6 342 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 PCMTD2Q9NV79 361 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 EVLQ9UI08 416 aaPredicted RBP16.44■□□□□ 0.22
TPM1-201ENST00000267996 CDH22Q9UJ99 828 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 SLC25A13Q9UJS0 675 aa16.44■□□□□ 0.22
TPM1-201ENST00000267996 NDUFAB1O14561 156 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 AURKAO14965 403 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 ADH1CP00326 375 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 F7P08709 466 aaPredicted RBP16.43■□□□□ 0.22
TPM1-201ENST00000267996 ADH5P11766 374 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 GRIA4P48058 902 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 SNRPD1P62314 119 aaKnown RBP16.43■□□□□ 0.22
TPM1-201ENST00000267996 MPP1Q00013 466 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 ADAM15Q13444 863 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 GRM3Q14832 879 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 INSCQ1MX18 579 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 ARMC12Q5T9G4 340 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 TMEM215Q68D42 235 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 MBLAC2Q68D91 279 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 ZNF470Q6ECI4 717 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 C22orf39Q6P5X5 142 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 GET4Q7L5D6 327 aaPredicted RBP16.43■□□□□ 0.22
TPM1-201ENST00000267996 CAMK1DQ8IU85 385 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 PLPP6Q8IY26 295 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 LRRC34Q8IZ02 419 aa16.43■□□□□ 0.22
TPM1-201ENST00000267996 TTC30BQ8N4P2 665 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms