RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PRMT1Q99873 361 aaKnown RBP8.29□□□□□ -1.08
PTPN3-201ENST00000262539 NEUROD4Q9HD90 331 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 GEMIN8Q9NWZ8 242 aaKnown RBP8.29□□□□□ -1.08
PTPN3-201ENST00000262539 ZNF236Q9UL36 1845 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 SPAG7O75391 227 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 BPGMP07738 259 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 CYP2A6P11509 494 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-201ENST00000262539 CD9P21926 228 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 ANGPT1Q15389 498 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 TRMT5Q32P41 509 aaKnown RBP8.29□□□□□ -1.08
PTPN3-201ENST00000262539 ADAMTSL2Q86TH1 951 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 TMPRSS6Q8IU80 811 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 CCDC185Q8N715 623 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 FBXO22Q8NEZ5 403 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 CEP70Q8NHQ1 597 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 STYXQ8WUJ0 223 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 NSL1Q96IY1 281 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 FAM111AQ96PZ2 611 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 RAP2CQ9Y3L5 183 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 ECM29Q5VYK3 1845 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 HDAC3O15379 428 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 ESR1P03372 595 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 FYNP06241 537 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 HOXA9P31269 272 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 EIF4HQ15056 248 aaKnown RBP8.29□□□□□ -1.08
PTPN3-201ENST00000262539 TAF5Q15542 800 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 AADACL2Q6P093 401 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 SYTL1Q8IYJ3 562 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 LGI2Q8N0V4 545 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 ZNF317Q96PQ6 595 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-201ENST00000262539 MTMR10Q9NXD2 777 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 VPS28Q9UK41 221 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 PLA2G4CQ9UP65 541 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 FAM50BQ9Y247 325 aa8.29□□□□□ -1.08
PTPN3-201ENST00000262539 SLC38A8A6NNN8 435 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 KRT8P05787 483 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 SNRPD1P62314 119 aaKnown RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 DSG1Q02413 1049 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 GALNT1Q10472 559 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 CAMK2GQ13555 558 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ZDHHC14Q8IZN3 488 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 PCYOX1LQ8NBM8 494 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ATAD1Q8NBU5 361 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 BRSK1Q8TDC3 778 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 DDI1Q8WTU0 396 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ACSF2Q96CM8 615 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 DNAJC1Q96KC8 554 aaKnown RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 MIR1-1HGQ9H1L0 117 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 PAPOLBQ9NRJ5 636 aaKnown RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 TRMT13Q9NUP7 481 aaKnown RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 PCMTD2Q9NV79 361 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 IGLV3-25P01717 112 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 CFHP08603 1231 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 POU2F2P09086 479 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 LPOP22079 712 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 MGAT1P26572 445 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 CSNK1DP48730 415 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 C5orf22Q49AR2 442 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ARMC12Q5T9G4 340 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 BNIPLQ7Z465 357 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 STAG3L4Q8TBR4 150 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 NUSAP1Q9BXS6 441 aaKnown RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ZNF556Q9HAH1 456 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 E2F8A0AVK6 867 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 DRGXA6NNA5 263 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 PRAMEF11O60813 436 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 LTA4HP09960 611 aaKnown RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 SYPL2Q5VXT5 272 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 CACUL1Q86Y37 369 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ARID3BQ8IVW6 561 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 DENND1AQ8TEH3 1009 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ERP27Q96DN0 273 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 TRIM4Q9C037 500 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 SPATS2LQ9NUQ6 558 aaKnown RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 GYG2O15488 501 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 FKBP6O75344 327 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 PMPCBO75439 489 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 WFS1O76024 890 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ZSCAN5DPP0CG00 497 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 HDCP19113 662 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 IL4RP24394 825 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 CAP1Q01518 475 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 CA9Q16790 459 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 TSTD2Q5T7W7 516 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 SLC39A11Q8N1S5 342 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 CPXM2Q8N436 756 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ARFGAP1Q8N6T3 406 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 C11orf49Q9H6J7 331 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 UNC5CO95185 931 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 CHRM3P20309 590 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 PAQR9Q6ZVX9 377 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 PAWRQ96IZ0 340 aaKnown RBP8.28□□□□□ -1.08
PTPN3-201ENST00000262539 PEBP4Q96S96 227 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 C17orf80Q9BSJ5 609 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 NLNQ9BYT8 704 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 TASP1Q9H6P5 420 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
PTPN3-201ENST00000262539 GSTM1P09488 218 aa8.27□□□□□ -1.08
PTPN3-201ENST00000262539 ALDH18A1P54886 795 aaKnown RBP8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms