RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 OR6J1Q8NGC5 347 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 SCAMP5Q8TAC9 235 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 COLEC11Q9BWP8 271 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CXorf21Q9HAI6 301 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CLK4Q9HAZ1 481 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 USP22Q9UPT9 525 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 PCDHGA7Q9Y5G6 932 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 USP2O75604 605 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 APOA4P06727 396 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ZNF182P17025 639 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 NFKBIAP25963 317 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 GGT5P36269 586 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 HSPA13P48723 471 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 NFYCQ13952 458 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 UGP2Q16851 508 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 C6orf10Q5SRN2 563 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 MFSD6LQ8IWD5 586 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 NUDT8Q8WV74 236 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 NSUN5Q96P11 429 aaKnown RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 CCDC28BQ9BUN5 200 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 PFDN4Q9NQP4 134 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 VTI1BQ9UEU0 232 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ADAM28Q9UKQ2 775 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 DHRS12A0PJE2 317 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 SUPT3HB4E1H0 165 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 GNGT2O14610 69 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 SBK3P0C264 359 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 HGFP14210 728 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ZNF26P17031 533 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ATP5F1P24539 256 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 PSMA4P25789 261 aaKnown RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ALDH4A1P30038 563 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 MAPK11Q15759 364 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 FGD3Q5JSP0 725 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ZNF484Q5JVG2 852 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 CLEC20AQ6ZU45 233 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 SNX29P2Q8IUI4 249 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 PTGR2Q8N8N7 351 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 GABPB2Q8TAK5 448 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 GPR152Q8TDT2 470 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 DLG3Q92796 817 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 HDAC10Q969S8 669 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ZNF560Q96MR9 790 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 GAD1Q99259 594 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 OSBPL2Q9H1P3 480 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 GBA3Q9H227 469 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 PCDH12Q9NPG4 1184 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 NDFIP2Q9NV92 336 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 SMOXQ9NWM0 555 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 IGSF9Q9P2J2 1179 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 EEF1DP29692 281 aaKnown RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 GLUD2P49448 558 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 LILRA4P59901 499 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 YBX1P67809 324 aaKnown RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 PKN3Q6P5Z2 889 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 MIB1Q86YT6 1006 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 MIER2Q8N344 545 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 TMEM102Q8N9M5 508 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-201ENST00000252597 OR10Q1Q8NGQ4 319 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 SPPL2BQ8TCT7 592 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 STYXQ8WUJ0 223 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ANKRD49Q8WVL7 239 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ASB9Q96DX5 294 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 C3orf30Q96M34 536 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 OLFM1Q99784 485 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 OSBPL11Q9BXB4 747 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 DUSP16Q9BY84 665 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 DNAI2Q9GZS0 605 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 PNPLA3Q9NST1 481 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 TBC1D23Q9NUY8 699 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 RBPJLQ9UBG7 517 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 ADAMTS5Q9UNA0 930 aa12.03□□□□□ -0.48
USHBP1-201ENST00000252597 A8MT66 165 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 FBP2O00757 339 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 SCAMP3O14828 347 aaKnown RBP12.02□□□□□ -0.49
USHBP1-201ENST00000252597 POMCP01189 267 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 PAMP19021 973 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 FASP25445 335 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 OXTRP30559 389 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 GRM5P41594 1212 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 CD86P42081 329 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 MAGEA10P43363 369 aaPredicted RBP12.02□□□□□ -0.49
USHBP1-201ENST00000252597 NPY2RP49146 381 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 RHDQ02161 417 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 PKDCCQ504Y2 493 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 SAMD4BQ5PRF9 694 aaKnown RBP12.02□□□□□ -0.49
USHBP1-201ENST00000252597 AGAP9Q5VTM2 703 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 FIBCD1Q8N539 461 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 PCYOX1LQ8NBM8 494 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 NCSTNQ92542 709 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 HSFY1Q96LI6 401 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 TEKT5Q96M29 485 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 GPR22Q99680 433 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 EML4Q9HC35 981 aaKnown RBP12.02□□□□□ -0.49
USHBP1-201ENST00000252597 MAGED1Q9Y5V3 778 aaPredicted RBP12.02□□□□□ -0.49
USHBP1-201ENST00000252597 PRSS51A0A1B0GVH4 220 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 NRG1Q02297 640 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms