RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 MZT1Q08AG7 82 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SEC23AQ15436 765 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 OCLNQ16625 522 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 FAM180BQ6P0A1 224 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 HORMAD2Q8N7B1 307 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 BRSK1Q8TDC3 778 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 RAB39BQ96DA2 213 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 NAT9Q9BTE0 207 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 NDC1Q9BTX1 674 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 DUS2Q9NX74 493 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 DEC1Q9P2X7 70 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ZMYM5Q9UJ78 669 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PTCD2Q8WV60 388 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 DYNLL2Q96FJ2 89 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TEFMQ96QE5 360 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 OSBPL3Q9H4L5 887 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.47□□□□□ -1.85
NEB-201ENST00000172853 PVALEFA0A1B0GWK0 134 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 ZNF806P0C7X5 589 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 PNMA6AP0CW24 399 aaPredicted RBP3.46□□□□□ -1.85
NEB-201ENST00000172853 MED22Q15528 200 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 C16orf46Q6P387 395 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 WDR59Q6PJI9 974 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 CCDC137Q6PK04 289 aaKnown RBP3.46□□□□□ -1.85
NEB-201ENST00000172853 RNF19BQ6ZMZ0 732 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 FAM129CQ86XR2 697 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 COLGALT1Q8NBJ5 622 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 TRPM4Q8TD43 1214 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 CNOT9Q92600 299 aaKnown RBP3.46□□□□□ -1.85
NEB-201ENST00000172853 RAD51AP1Q96B01 352 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 EURLQ9NYK6 297 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 H0Y858 1186 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 CHRNGP07510 517 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 INO80DQ53TQ3 878 aaPredicted RBP3.46□□□□□ -1.85
NEB-201ENST00000172853 GLT6D1Q7Z4J2 308 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 FRMD5Q7Z6J6 570 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 FAM35AQ86V20 835 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 PDPRQ8NCN5 879 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 OR4C15Q8NGM1 316 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 THOC1Q96FV9 657 aaKnown RBP3.46□□□□□ -1.85
NEB-201ENST00000172853 ABHD16BQ9H3Z7 469 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 BCAS1O75363 584 aaPredicted RBP3.46□□□□□ -1.85
NEB-201ENST00000172853 PTPN2P17706 415 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 CYP2F1P24903 491 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 MAPK10P53779 464 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 LAPTM5Q13571 262 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 ACSM2BQ68CK6 577 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 ZNF621Q6ZSS3 439 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 PTCHD4Q6ZW05 846 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 ADGRF4Q8IZF3 695 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 ZNF709Q8N972 641 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.46□□□□□ -1.85
NEB-201ENST00000172853 NIF3L1Q9GZT8 377 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 DEFB129Q9H1M3 183 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 DCTN4Q9UJW0 460 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 PCDHB2Q9Y5E7 798 aa3.46□□□□□ -1.85
NEB-201ENST00000172853 MAGEA13PA6NCF6 341 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 PGRMC2O15173 223 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 CNTFP26441 200 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 IL5RAQ01344 420 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 MBTD1Q05BQ5 628 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 LRIF1Q5T3J3 769 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SPESP1Q6UW49 350 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 YTHDF3Q7Z739 585 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 ZDHHC17Q8IUH5 632 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 HJURPQ8NCD3 748 aaPredicted RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 TMEM161BQ8NDZ6 487 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 CHCHD6Q9BRQ6 235 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ZNF355PQ9NSJ1 428 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ZDHHC9Q9Y397 364 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 DUSP10Q9Y6W6 482 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ATP10BO94823 1461 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 FTCDNL1E5RQL4 147 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 OR1I1O60431 355 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 KAT7O95251 611 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ELFN1P0C7U0 828 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 NR4A1P22736 598 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 HSD11B1P28845 292 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SLC26A5P58743 744 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SPIRE1Q08AE8 756 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 C2orf80Q0P641 193 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 MPPED2Q15777 294 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 DCP2Q8IU60 420 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 KAT2BQ92831 832 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SGSM3Q96HU1 749 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GPAMQ9HCL2 828 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TMEM8AQ9HCN3 771 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 IKZF2Q9UKS7 526 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ZNF175Q9Y473 711 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 KDM5AP29375 1690 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 ADCY10Q96PN6 1610 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 CNTNAP2Q9UHC6 1331 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 LIN7AO14910 233 aaPredicted RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 RENP00797 406 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TAF5Q15542 800 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SMIM15Q7Z3B0 74 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 KCTD14Q9BQ13 255 aaPredicted RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 A0A1W2PP64 1363 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 INSRP06213 1382 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GRID2IPA4D2P6 1211 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms