RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 MBIPQ9NS73 344 aa14.94□□□□□ -0.02
SPCS1-206ENST00000619898 CHMP3Q9Y3E7 222 aa14.94□□□□□ -0.02
SPCS1-206ENST00000619898 GNAI3P08754 354 aa14.94□□□□□ -0.02
SPCS1-206ENST00000619898 CCDC39Q9UFE4 941 aa14.94□□□□□ -0.02
SPCS1-206ENST00000619898 SMC3Q9UQE7 1217 aa14.93□□□□□ -0.02
SPCS1-206ENST00000619898 PTPRTO14522 1441 aa14.93□□□□□ -0.02
SPCS1-206ENST00000619898 POLR1AO95602 1720 aaPredicted RBP14.93□□□□□ -0.02
SPCS1-206ENST00000619898 FAM83GA6ND36 823 aa14.93□□□□□ -0.02
SPCS1-206ENST00000619898 GOLGA6L6A8MZA4 724 aa14.93□□□□□ -0.02
SPCS1-206ENST00000619898 UBTFL1P0CB47 393 aaPredicted RBP14.93□□□□□ -0.02
SPCS1-206ENST00000619898 MCM10Q7L590 875 aa14.93□□□□□ -0.02
SPCS1-206ENST00000619898 EXOC6BQ9Y2D4 811 aa14.93□□□□□ -0.02
SPCS1-206ENST00000619898 MPNDQ8N594 471 aa14.93□□□□□ -0.02
SPCS1-206ENST00000619898 ABCC2Q92887 1545 aa14.93□□□□□ -0.02
SPCS1-206ENST00000619898 VPS37CA5D8V6 355 aaPredicted RBP14.92□□□□□ -0.02
SPCS1-206ENST00000619898 RRP9O43818 475 aaKnown RBP14.92□□□□□ -0.02
SPCS1-206ENST00000619898 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
SPCS1-206ENST00000619898 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
SPCS1-206ENST00000619898 SURF6O75683 361 aaKnown RBP14.92□□□□□ -0.02
SPCS1-206ENST00000619898 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
SPCS1-206ENST00000619898 TSPYL6Q8N831 410 aa14.92□□□□□ -0.02
SPCS1-206ENST00000619898 SYCE3A1L190 88 aa14.91□□□□□ -0.02
SPCS1-206ENST00000619898 GAS2L2Q8NHY3 880 aa14.91□□□□□ -0.02
SPCS1-206ENST00000619898 LRRCC1Q9C099 1032 aa14.91□□□□□ -0.02
SPCS1-206ENST00000619898 TSPY26PQ9H489 355 aa14.91□□□□□ -0.02
SPCS1-206ENST00000619898 CCT4P50991 539 aaKnown RBP14.91□□□□□ -0.02
SPCS1-206ENST00000619898 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
SPCS1-206ENST00000619898 RUFY2Q8WXA3 655 aa14.91□□□□□ -0.02
SPCS1-206ENST00000619898 ARHGAP45Q92619 1136 aa14.91□□□□□ -0.02
SPCS1-206ENST00000619898 HDAC5Q9UQL6 1122 aa14.91□□□□□ -0.02
SPCS1-206ENST00000619898 ATP10AO60312 1499 aa14.9□□□□□ -0.02
SPCS1-206ENST00000619898 CD109Q6YHK3 1445 aa14.9□□□□□ -0.02
SPCS1-206ENST00000619898 KLHL40Q2TBA0 621 aa14.9□□□□□ -0.02
SPCS1-206ENST00000619898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■□□□□ 11.3
SPCS1-206ENST00000619898 RAB3GAP1Q15042 981 aa14.9□□□□□ -0.02
SPCS1-206ENST00000619898 MRPL50Q8N5N7 158 aaKnown RBP14.9□□□□□ -0.02
SPCS1-206ENST00000619898 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
SPCS1-206ENST00000619898 A0A1W2PP64 1363 aa14.9□□□□□ -0.02
SPCS1-206ENST00000619898 USP19O94966 1318 aa14.9□□□□□ -0.02
SPCS1-206ENST00000619898 FBXO31Q5XUX0 539 aaPredicted RBP14.9□□□□□ -0.02
SPCS1-206ENST00000619898 NUDT16Q96DE0 195 aaKnown RBP14.9□□□□□ -0.02
SPCS1-206ENST00000619898 VAMP4O75379 141 aa14.89□□□□□ -0.03
SPCS1-206ENST00000619898 HSP90B1P14625 803 aaKnown RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 ZKSCAN1P17029 563 aaPredicted RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 TEFQ10587 303 aa14.89□□□□□ -0.03
SPCS1-206ENST00000619898 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
SPCS1-206ENST00000619898 C9orf78Q9NZ63 289 aaPredicted RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 CCDC9Q9Y3X0 531 aaKnown RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 SYNMO15061 1565 aa14.89□□□□□ -0.03
SPCS1-206ENST00000619898 HTATSF1O43719 755 aaKnown RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 RBM25P49756 843 aaKnown RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 TTC22Q5TAA0 569 aa14.89□□□□□ -0.03
SPCS1-206ENST00000619898 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 ERVK-7P63135 1459 aa14.89□□□□□ -0.03
SPCS1-206ENST00000619898 C8orf58Q8NAV2 365 aa14.89□□□□□ -0.03
SPCS1-206ENST00000619898 PUS7Q96PZ0 661 aaKnown RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
SPCS1-206ENST00000619898 F6X3S4 739 aa14.88□□□□□ -0.03
SPCS1-206ENST00000619898 NUTM2GQ5VZR2 741 aa14.88□□□□□ -0.03
SPCS1-206ENST00000619898 PHACTR3Q96KR7 559 aa14.88□□□□□ -0.03
SPCS1-206ENST00000619898 FIBPO43427 364 aa14.88□□□□□ -0.03
SPCS1-206ENST00000619898 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
SPCS1-206ENST00000619898 KDM5AP29375 1690 aaKnown RBP14.88□□□□□ -0.03
SPCS1-206ENST00000619898 NRDCO43847 1150 aa14.88□□□□□ -0.03
SPCS1-206ENST00000619898 IFIT2P09913 472 aaKnown RBP14.88□□□□□ -0.03
SPCS1-206ENST00000619898 IL1RAPL2Q9NP60 686 aa14.88□□□□□ -0.03
SPCS1-206ENST00000619898 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
SPCS1-206ENST00000619898 POLKQ9UBT6 870 aa14.87□□□□□ -0.03
SPCS1-206ENST00000619898 ADCY10Q96PN6 1610 aa14.87□□□□□ -0.03
SPCS1-206ENST00000619898 ZBTB7BO15156 539 aaPredicted RBP14.86□□□□□ -0.03
SPCS1-206ENST00000619898 MAP4K4O95819 1239 aaPredicted RBP14.86□□□□□ -0.03
SPCS1-206ENST00000619898 CROCC2H7BZ55 1655 aa14.86□□□□□ -0.03
SPCS1-206ENST00000619898 NLRP6P59044 892 aa14.86□□□□□ -0.03
SPCS1-206ENST00000619898 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
SPCS1-206ENST00000619898 SDSP20132 328 aa14.86□□□□□ -0.03
SPCS1-206ENST00000619898 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.86□□□□□ -0.03
SPCS1-206ENST00000619898 UBE2Q2Q8WVN8 375 aa14.85□□□□□ -0.03
SPCS1-206ENST00000619898 WDR33Q9C0J8 1336 aaKnown RBP14.85□□□□□ -0.03
SPCS1-206ENST00000619898 XPCQ01831 940 aaPredicted RBP14.85□□□□□ -0.03
SPCS1-206ENST00000619898 CNTROBQ8N137 903 aa14.85□□□□□ -0.03
SPCS1-206ENST00000619898 HSP90AB4PQ58FF6 505 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 TSHZ3Q63HK5 1081 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 MAP7D2Q96T17 732 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 MEIS3Q99687 375 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 TTC37Q6PGP7 1564 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 PREX2Q70Z35 1606 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 UQCRHLA0A096LP55 91 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 UQCRHP07919 91 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 SBNO2Q9Y2G9 1366 aa14.84□□□□□ -0.03
SPCS1-206ENST00000619898 MX1P20591 662 aa14.83□□□□□ -0.03
SPCS1-206ENST00000619898 ZSCAN23Q3MJ62 389 aa14.83□□□□□ -0.03
SPCS1-206ENST00000619898 HDGFL1Q5TGJ6 251 aa14.83□□□□□ -0.03
SPCS1-206ENST00000619898 H3BQV1 296 aa14.83□□□□□ -0.04
SPCS1-206ENST00000619898 IFFO2Q5TF58 517 aa14.83□□□□□ -0.04
SPCS1-206ENST00000619898 WASLO00401 505 aaPredicted RBP14.83□□□□□ -0.04
SPCS1-206ENST00000619898 PLEKHM2Q8IWE5 1019 aa14.83□□□□□ -0.04
SPCS1-206ENST00000619898 CLASRPQ8N2M8 674 aaKnown RBP14.83□□□□□ -0.04
SPCS1-206ENST00000619898 ANKRD44Q8N8A2 993 aa14.83□□□□□ -0.04
SPCS1-206ENST00000619898 CFAP65Q6ZU64 1925 aaKnown RBP14.83□□□□□ -0.04
SPCS1-206ENST00000619898 ZMYM3Q14202 1370 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms