RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ERC1Q8IUD2 1116 aa10.64□□□□□ -0.71
PDE6A-204ENST00000613228 SYAP1Q96A49 352 aaPredicted RBP10.64□□□□□ -0.71
PDE6A-204ENST00000613228 CCDC9Q9Y3X0 531 aaKnown RBP10.64□□□□□ -0.71
PDE6A-204ENST00000613228 ABCC3O15438 1527 aa10.64□□□□□ -0.71
PDE6A-204ENST00000613228 NFKBIBQ15653 356 aa10.64□□□□□ -0.71
PDE6A-204ENST00000613228 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
PDE6A-204ENST00000613228 GNAT3A8MTJ3 354 aa10.64□□□□□ -0.71
PDE6A-204ENST00000613228 GOLGA6L6A8MZA4 724 aa10.64□□□□□ -0.71
PDE6A-204ENST00000613228 TBX22Q9Y458 520 aa10.64□□□□□ -0.71
PDE6A-204ENST00000613228 CCDC66A2RUB6 948 aa10.63□□□□□ -0.71
PDE6A-204ENST00000613228 UBTFL1P0CB47 393 aaPredicted RBP10.63□□□□□ -0.71
PDE6A-204ENST00000613228 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
PDE6A-204ENST00000613228 KIF3AQ9Y496 699 aa10.63□□□□□ -0.71
PDE6A-204ENST00000613228 CDC45O75419 566 aa10.63□□□□□ -0.71
PDE6A-204ENST00000613228 EIF2S2P20042 333 aaKnown RBP10.63□□□□□ -0.71
PDE6A-204ENST00000613228 ZMYM4Q5VZL5 1548 aa10.63□□□□□ -0.71
PDE6A-204ENST00000613228 EDC4Q6P2E9 1401 aaKnown RBP10.63□□□□□ -0.71
PDE6A-204ENST00000613228 GZF1Q9H116 711 aaPredicted RBP10.62□□□□□ -0.71
PDE6A-204ENST00000613228 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
PDE6A-204ENST00000613228 LAMC1P11047 1609 aa10.62□□□□□ -0.71
PDE6A-204ENST00000613228 G3BP1Q13283 466 aaKnown RBP eCLIP10.62□□□□□ -0.71
PDE6A-204ENST00000613228 BBXQ8WY36 941 aaPredicted RBP10.62□□□□□ -0.71
PDE6A-204ENST00000613228 TMX4Q9H1E5 349 aaPredicted RBP10.62□□□□□ -0.71
PDE6A-204ENST00000613228 DMRT2Q9Y5R5 561 aa10.62□□□□□ -0.71
PDE6A-204ENST00000613228 GNAI2P04899 355 aa10.62□□□□□ -0.71
PDE6A-204ENST00000613228 NME9Q86XW9 330 aa10.62□□□□□ -0.71
PDE6A-204ENST00000613228 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
PDE6A-204ENST00000613228 IFIT2P09913 472 aaKnown RBP10.61□□□□□ -0.71
PDE6A-204ENST00000613228 BLMP54132 1417 aaPredicted RBP10.61□□□□□ -0.71
PDE6A-204ENST00000613228 PER1O15534 1290 aaPredicted RBP10.61□□□□□ -0.71
PDE6A-204ENST00000613228 RRS1Q15050 365 aaKnown RBP10.61□□□□□ -0.71
PDE6A-204ENST00000613228 SKOR2Q2VWA4 1001 aaPredicted RBP10.61□□□□□ -0.71
PDE6A-204ENST00000613228 SPHKAPQ2M3C7 1700 aa10.61□□□□□ -0.71
PDE6A-204ENST00000613228 NLRP1Q9C000 1473 aa10.61□□□□□ -0.71
PDE6A-204ENST00000613228 DUSP27Q5VZP5 1158 aa10.61□□□□□ -0.71
PDE6A-204ENST00000613228 ACEP12821 1306 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 HIP1O00291 1037 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 RARSP54136 660 aaKnown RBP10.6□□□□□ -0.71
PDE6A-204ENST00000613228 NUTM2GQ5VZR2 741 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 RPAP2Q8IXW5 612 aaPredicted RBP10.6□□□□□ -0.71
PDE6A-204ENST00000613228 ZNF530Q6P9A1 599 aaPredicted RBP10.6□□□□□ -0.71
PDE6A-204ENST00000613228 DIAPH3Q9NSV4 1193 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 ERVK-7P63135 1459 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 PTPRCP08575 1304 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
PDE6A-204ENST00000613228 BCAR3O75815 825 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 RIC3Q7Z5B4 369 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 GOLGA6L1Q8N7Z2 621 aa10.6□□□□□ -0.71
PDE6A-204ENST00000613228 TSR2Q969E8 191 aaKnown RBP10.6□□□□□ -0.71
PDE6A-204ENST00000613228 INO80Q9ULG1 1556 aaPredicted RBP10.59□□□□□ -0.71
PDE6A-204ENST00000613228 SRCIN1Q9C0H9 1055 aa10.59□□□□□ -0.71
PDE6A-204ENST00000613228 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
PDE6A-204ENST00000613228 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
PDE6A-204ENST00000613228 TRPM1Q7Z4N2 1603 aa10.59□□□□□ -0.71
PDE6A-204ENST00000613228 A0A1W2PP64 1363 aa10.59□□□□□ -0.71
PDE6A-204ENST00000613228 YEATS2Q9ULM3 1422 aa10.59□□□□□ -0.71
PDE6A-204ENST00000613228 FYB1O15117 783 aa10.59□□□□□ -0.71
PDE6A-204ENST00000613228 ARHGAP45Q92619 1136 aa10.59□□□□□ -0.71
PDE6A-204ENST00000613228 ATP6V1DQ9Y5K8 247 aa10.58□□□□□ -0.72
PDE6A-204ENST00000613228 MAP3K4Q9Y6R4 1608 aa10.58□□□□□ -0.72
PDE6A-204ENST00000613228 PLA2R1Q13018 1463 aa10.58□□□□□ -0.72
PDE6A-204ENST00000613228 RNF20Q5VTR2 975 aa10.58□□□□□ -0.72
PDE6A-204ENST00000613228 PDZRN3Q9UPQ7 1066 aa10.58□□□□□ -0.72
PDE6A-204ENST00000613228 MRE11P49959 708 aa10.58□□□□□ -0.72
PDE6A-204ENST00000613228 HDGFL1Q5TGJ6 251 aa10.58□□□□□ -0.72
PDE6A-204ENST00000613228 PLEKHG1Q9ULL1 1385 aa10.58□□□□□ -0.72
PDE6A-204ENST00000613228 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
PDE6A-204ENST00000613228 CEBPAP49715 358 aaPredicted RBP10.57□□□□□ -0.72
PDE6A-204ENST00000613228 ZC3H13Q5T200 1668 aaKnown RBP10.57□□□□□ -0.72
PDE6A-204ENST00000613228 PHF14O94880 888 aa10.57□□□□□ -0.72
PDE6A-204ENST00000613228 RILPL2Q969X0 211 aa10.57□□□□□ -0.72
PDE6A-204ENST00000613228 GLI2P10070 1586 aa10.57□□□□□ -0.72
PDE6A-204ENST00000613228 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
PDE6A-204ENST00000613228 ZKSCAN1P17029 563 aaPredicted RBP10.57□□□□□ -0.72
PDE6A-204ENST00000613228 CNTROBQ8N137 903 aa10.57□□□□□ -0.72
PDE6A-204ENST00000613228 SETBP1Q9Y6X0 1596 aa10.57□□□□□ -0.72
PDE6A-204ENST00000613228 CLTCL1P53675 1640 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 CABP4P57796 275 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 KIF6Q6ZMV9 814 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 CADPS2Q86UW7 1296 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 ATP7BP35670 1465 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
PDE6A-204ENST00000613228 EMILIN1Q9Y6C2 1016 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 FLT4P35916 1363 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 C22orf23Q9BZE7 217 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 RNF17Q9BXT8 1623 aaKnown RBP10.56□□□□□ -0.72
PDE6A-204ENST00000613228 BTBD11A6QL63 1104 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 NRDCO43847 1150 aa10.56□□□□□ -0.72
PDE6A-204ENST00000613228 SLKQ9H2G2 1235 aaPredicted RBP10.56□□□□□ -0.72
PDE6A-204ENST00000613228 MSH6P52701 1360 aa10.55□□□□□ -0.72
PDE6A-204ENST00000613228 MCM2P49736 904 aa10.55□□□□□ -0.72
PDE6A-204ENST00000613228 TSPYL1Q9H0U9 437 aa10.55□□□□□ -0.72
PDE6A-204ENST00000613228 CHMP5Q9NZZ3 219 aa10.55□□□□□ -0.72
PDE6A-204ENST00000613228 ADGRB3O60242 1522 aa10.55□□□□□ -0.72
PDE6A-204ENST00000613228 FAM135BQ49AJ0 1406 aa10.55□□□□□ -0.72
PDE6A-204ENST00000613228 NEURL4Q96JN8 1562 aa10.55□□□□□ -0.72
PDE6A-204ENST00000613228 RAB11FIP3O75154 756 aa10.54□□□□□ -0.72
PDE6A-204ENST00000613228 SETQ01105 290 aaPredicted RBP10.54□□□□□ -0.72
PDE6A-204ENST00000613228 GNL2Q13823 731 aaKnown RBP10.54□□□□□ -0.72
PDE6A-204ENST00000613228 BACH2Q9BYV9 841 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms