RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 NCOA3Q9Y6Q9 1424 aa13.38□□□□□ -0.27
VPS25-206ENST00000591584 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
VPS25-206ENST00000591584 C20orf194Q5TEA3 1177 aa13.37□□□□□ -0.27
VPS25-206ENST00000591584 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
VPS25-206ENST00000591584 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
VPS25-206ENST00000591584 HMOX1P09601 288 aa13.36□□□□□ -0.27
VPS25-206ENST00000591584 AMPHP49418 695 aa13.36□□□□□ -0.27
VPS25-206ENST00000591584 NLRP6P59044 892 aa13.36□□□□□ -0.27
VPS25-206ENST00000591584 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
VPS25-206ENST00000591584 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
VPS25-206ENST00000591584 EXOSC9Q06265 439 aaKnown RBP13.35□□□□□ -0.27
VPS25-206ENST00000591584 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
VPS25-206ENST00000591584 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
VPS25-206ENST00000591584 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
VPS25-206ENST00000591584 ZNF853P0CG23 659 aa13.34□□□□□ -0.27
VPS25-206ENST00000591584 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
VPS25-206ENST00000591584 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
VPS25-206ENST00000591584 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
VPS25-206ENST00000591584 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
VPS25-206ENST00000591584 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
VPS25-206ENST00000591584 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
VPS25-206ENST00000591584 RTL1A6NKG5 1358 aa13.33□□□□□ -0.27
VPS25-206ENST00000591584 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
VPS25-206ENST00000591584 PSME1Q06323 249 aa13.33□□□□□ -0.28
VPS25-206ENST00000591584 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
VPS25-206ENST00000591584 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
VPS25-206ENST00000591584 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
VPS25-206ENST00000591584 USP54Q70EL1 1684 aa13.33□□□□□ -0.28
VPS25-206ENST00000591584 KDM2BQ8NHM5 1336 aa13.33□□□□□ -0.28
VPS25-206ENST00000591584 KIF16BQ96L93 1317 aa13.33□□□□□ -0.28
VPS25-206ENST00000591584 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
VPS25-206ENST00000591584 ARHGAP45Q92619 1136 aa13.32□□□□□ -0.28
VPS25-206ENST00000591584 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
VPS25-206ENST00000591584 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
VPS25-206ENST00000591584 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
VPS25-206ENST00000591584 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
VPS25-206ENST00000591584 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
VPS25-206ENST00000591584 KDRP35968 1356 aa13.31□□□□□ -0.28
VPS25-206ENST00000591584 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
VPS25-206ENST00000591584 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
VPS25-206ENST00000591584 IGSF1Q8N6C5 1336 aa13.3□□□□□ -0.28
VPS25-206ENST00000591584 HOXC9P31274 260 aa13.29□□□□□ -0.28
VPS25-206ENST00000591584 ATF7IPQ6VMQ6 1270 aa13.29□□□□□ -0.28
VPS25-206ENST00000591584 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
VPS25-206ENST00000591584 SSH1Q8WYL5 1049 aa13.29□□□□□ -0.28
VPS25-206ENST00000591584 DDX19BQ9UMR2 479 aa13.29□□□□□ -0.28
VPS25-206ENST00000591584 DCCP43146 1447 aa13.29□□□□□ -0.28
VPS25-206ENST00000591584 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
VPS25-206ENST00000591584 IP6K1Q92551 441 aa13.28□□□□□ -0.28
VPS25-206ENST00000591584 BABAM1Q9NWV8 329 aa13.28□□□□□ -0.28
VPS25-206ENST00000591584 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
VPS25-206ENST00000591584 VAMP4O75379 141 aa13.27□□□□□ -0.29
VPS25-206ENST00000591584 ATF3P18847 181 aa13.27□□□□□ -0.29
VPS25-206ENST00000591584 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
VPS25-206ENST00000591584 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
VPS25-206ENST00000591584 RWDD1Q9H446 243 aaPredicted RBP13.27□□□□□ -0.29
VPS25-206ENST00000591584 COG6Q9Y2V7 657 aa13.27□□□□□ -0.29
VPS25-206ENST00000591584 RGPD8O14715 1765 aaPredicted RBP13.27□□□□□ -0.29
VPS25-206ENST00000591584 CHL1O00533 1208 aa13.26□□□□□ -0.29
VPS25-206ENST00000591584 RGPD1P0DJD0 1748 aa13.26□□□□□ -0.29
VPS25-206ENST00000591584 MST1RQ04912 1400 aa13.26□□□□□ -0.29
VPS25-206ENST00000591584 KIAA0232Q92628 1395 aa13.26□□□□□ -0.29
VPS25-206ENST00000591584 EYA1Q99502 592 aa13.26□□□□□ -0.29
VPS25-206ENST00000591584 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
VPS25-206ENST00000591584 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
VPS25-206ENST00000591584 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
VPS25-206ENST00000591584 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
VPS25-206ENST00000591584 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
VPS25-206ENST00000591584 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
VPS25-206ENST00000591584 SOX12O15370 315 aa13.24□□□□□ -0.29
VPS25-206ENST00000591584 TRIM27P14373 513 aa13.24□□□□□ -0.29
VPS25-206ENST00000591584 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
VPS25-206ENST00000591584 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
VPS25-206ENST00000591584 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
VPS25-206ENST00000591584 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
VPS25-206ENST00000591584 KRT28Q7Z3Y7 464 aa13.23□□□□□ -0.29
VPS25-206ENST00000591584 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
VPS25-206ENST00000591584 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
VPS25-206ENST00000591584 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
VPS25-206ENST00000591584 KIF1AQ12756 1690 aa13.23□□□□□ -0.29
VPS25-206ENST00000591584 MTHFSDQ2M296 383 aaKnown RBP13.22□□□□□ -0.29
VPS25-206ENST00000591584 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
VPS25-206ENST00000591584 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.29
VPS25-206ENST00000591584 FOXO3O43524 673 aa13.21□□□□□ -0.29
VPS25-206ENST00000591584 GCP02774 474 aa13.21□□□□□ -0.29
VPS25-206ENST00000591584 RLBP1P12271 317 aa13.21□□□□□ -0.29
VPS25-206ENST00000591584 PDE4AP27815 886 aa13.21□□□□□ -0.29
VPS25-206ENST00000591584 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
VPS25-206ENST00000591584 THUMPD2Q9BTF0 503 aaKnown RBP13.21□□□□□ -0.29
VPS25-206ENST00000591584 BACH2Q9BYV9 841 aa13.21□□□□□ -0.29
VPS25-206ENST00000591584 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
VPS25-206ENST00000591584 USP19O94966 1318 aa13.2□□□□□ -0.3
VPS25-206ENST00000591584 HDAC1Q13547 482 aaPredicted RBP13.2□□□□□ -0.3
VPS25-206ENST00000591584 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
VPS25-206ENST00000591584 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
VPS25-206ENST00000591584 CRB1P82279 1406 aa13.2□□□□□ -0.3
VPS25-206ENST00000591584 NPHP3Q7Z494 1330 aa13.19□□□□□ -0.3
VPS25-206ENST00000591584 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
VPS25-206ENST00000591584 AMOTQ4VCS5 1084 aa13.19□□□□□ -0.3
VPS25-206ENST00000591584 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms