RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 BCL11AQ9H165 835 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 MROH2AA6NES4 1674 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 GNAT3A8MTJ3 354 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 HTATSF1O43719 755 aaKnown RBP9.47□□□□□ -0.89
ZNF554-202ENST00000588534 IP6K1Q92551 441 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 HMMRO75330 724 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 RWDD1Q9H446 243 aaPredicted RBP9.47□□□□□ -0.89
ZNF554-202ENST00000588534 SBNO1A3KN83 1393 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 SLIT1O75093 1534 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 NPHP1O15259 732 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 ORAI2Q96SN7 254 aa9.47□□□□□ -0.89
ZNF554-202ENST00000588534 KIF24Q5T7B8 1368 aa9.46□□□□□ -0.89
ZNF554-202ENST00000588534 ADAMTS13Q76LX8 1427 aa9.46□□□□□ -0.89
ZNF554-202ENST00000588534 IL16Q14005 1332 aa9.46□□□□□ -0.89
ZNF554-202ENST00000588534 AATKQ6ZMQ8 1374 aa9.46□□□□□ -0.89
ZNF554-202ENST00000588534 TMEM131LA2VDJ0 1609 aa9.46□□□□□ -0.9
ZNF554-202ENST00000588534 ANKRD24Q8TF21 1146 aa9.46□□□□□ -0.9
ZNF554-202ENST00000588534 CCDC30Q5VVM6 783 aa9.46□□□□□ -0.9
ZNF554-202ENST00000588534 ARHGAP23Q9P227 1491 aa9.45□□□□□ -0.9
ZNF554-202ENST00000588534 IRX6P78412 446 aaPredicted RBP9.45□□□□□ -0.9
ZNF554-202ENST00000588534 NEXNQ0ZGT2 675 aa9.45□□□□□ -0.9
ZNF554-202ENST00000588534 CCDC27Q2M243 656 aa9.45□□□□□ -0.9
ZNF554-202ENST00000588534 ANP32EQ9BTT0 268 aa9.45□□□□□ -0.9
ZNF554-202ENST00000588534 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
ZNF554-202ENST00000588534 ITPRIPQ8IWB1 547 aa9.45□□□□□ -0.9
ZNF554-202ENST00000588534 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
ZNF554-202ENST00000588534 IFT57Q9NWB7 429 aa9.45□□□□□ -0.9
ZNF554-202ENST00000588534 CABP4P57796 275 aa9.44□□□□□ -0.9
ZNF554-202ENST00000588534 NKTRP30414 1462 aaKnown RBP9.44□□□□□ -0.9
ZNF554-202ENST00000588534 WWC1Q8IX03 1113 aa9.44□□□□□ -0.9
ZNF554-202ENST00000588534 USP6P35125 1406 aa9.44□□□□□ -0.9
ZNF554-202ENST00000588534 RRP1P56182 461 aaKnown RBP9.43□□□□□ -0.9
ZNF554-202ENST00000588534 MAP3K19Q56UN5 1328 aa9.43□□□□□ -0.9
ZNF554-202ENST00000588534 CASC1Q6TDU7 716 aa9.43□□□□□ -0.9
ZNF554-202ENST00000588534 IFNL2Q8IZJ0 200 aa9.43□□□□□ -0.9
ZNF554-202ENST00000588534 DDX19BQ9UMR2 479 aa9.43□□□□□ -0.9
ZNF554-202ENST00000588534 TULP4Q9NRJ4 1543 aa9.43□□□□□ -0.9
ZNF554-202ENST00000588534 OS9Q13438 667 aaPredicted RBP9.43□□□□□ -0.9
ZNF554-202ENST00000588534 CCDC184Q52MB2 194 aa9.42□□□□□ -0.9
ZNF554-202ENST00000588534 HSP90AB2PQ58FF8 381 aa9.42□□□□□ -0.9
ZNF554-202ENST00000588534 ZNF335Q9H4Z2 1342 aaPredicted RBP9.42□□□□□ -0.9
ZNF554-202ENST00000588534 EXOC5O00471 708 aa9.42□□□□□ -0.9
ZNF554-202ENST00000588534 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
ZNF554-202ENST00000588534 HOXC9P31274 260 aa9.42□□□□□ -0.9
ZNF554-202ENST00000588534 EIF4A2Q14240 407 aaKnown RBP9.42□□□□□ -0.9
ZNF554-202ENST00000588534 TAF7Q15545 349 aaPredicted RBP9.42□□□□□ -0.9
ZNF554-202ENST00000588534 USP35Q9P2H5 1018 aa9.42□□□□□ -0.9
ZNF554-202ENST00000588534 SLFN5Q08AF3 891 aa9.41□□□□□ -0.9
ZNF554-202ENST00000588534 TWISTNBQ3B726 338 aaPredicted RBP9.41□□□□□ -0.9
ZNF554-202ENST00000588534 DZIP1LQ8IYY4 767 aaKnown RBP9.41□□□□□ -0.9
ZNF554-202ENST00000588534 SYTL4Q96C24 671 aaPredicted RBP9.41□□□□□ -0.9
ZNF554-202ENST00000588534 RTL1A6NKG5 1358 aa9.41□□□□□ -0.9
ZNF554-202ENST00000588534 PRR36Q9H6K5 1346 aa9.41□□□□□ -0.9
ZNF554-202ENST00000588534 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
ZNF554-202ENST00000588534 MSH5O43196 834 aa9.41□□□□□ -0.9
ZNF554-202ENST00000588534 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
ZNF554-202ENST00000588534 ELL2O00472 640 aaPredicted RBP9.41□□□□□ -0.9
ZNF554-202ENST00000588534 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
ZNF554-202ENST00000588534 PDE3AQ14432 1141 aa9.4□□□□□ -0.9
ZNF554-202ENST00000588534 MYO3AQ8NEV4 1616 aa9.4□□□□□ -0.9
ZNF554-202ENST00000588534 EIF2S2P20042 333 aaKnown RBP9.4□□□□□ -0.9
ZNF554-202ENST00000588534 DDX54Q8TDD1 881 aaKnown RBP9.4□□□□□ -0.9
ZNF554-202ENST00000588534 BABAM1Q9NWV8 329 aa9.4□□□□□ -0.9
ZNF554-202ENST00000588534 DCCP43146 1447 aa9.4□□□□□ -0.9
ZNF554-202ENST00000588534 ZNF330Q9Y3S2 320 aaPredicted RBP9.4□□□□□ -0.9
ZNF554-202ENST00000588534 SOS1Q07889 1333 aaPredicted RBP9.4□□□□□ -0.91
ZNF554-202ENST00000588534 ADGRB1O14514 1584 aa9.4□□□□□ -0.91
ZNF554-202ENST00000588534 EXOSC9Q06265 439 aaKnown RBP9.4□□□□□ -0.91
ZNF554-202ENST00000588534 SLC4A10Q6U841 1118 aa9.4□□□□□ -0.91
ZNF554-202ENST00000588534 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
ZNF554-202ENST00000588534 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
ZNF554-202ENST00000588534 TEX13AQ9BXU3 409 aaPredicted RBP9.39□□□□□ -0.91
ZNF554-202ENST00000588534 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
ZNF554-202ENST00000588534 VIRMAQ69YN4 1812 aaKnown RBP9.39□□□□□ -0.91
ZNF554-202ENST00000588534 ALDH1L2Q3SY69 923 aa9.39□□□□□ -0.91
ZNF554-202ENST00000588534 PPLO60437 1756 aa9.39□□□□□ -0.91
ZNF554-202ENST00000588534 IL13P35225 146 aa9.39□□□□□ -0.91
ZNF554-202ENST00000588534 FKBP5Q13451 457 aaPredicted RBP9.39□□□□□ -0.91
ZNF554-202ENST00000588534 MED14O60244 1454 aa9.38□□□□□ -0.91
ZNF554-202ENST00000588534 ZCRB1Q8TBF4 217 aaKnown RBP9.38□□□□□ -0.91
ZNF554-202ENST00000588534 TMX4Q9H1E5 349 aaPredicted RBP9.38□□□□□ -0.91
ZNF554-202ENST00000588534 IL2RBP14784 551 aa9.38□□□□□ -0.91
ZNF554-202ENST00000588534 CHRNA2Q15822 529 aa9.38□□□□□ -0.91
ZNF554-202ENST00000588534 HDGFL1Q5TGJ6 251 aa9.38□□□□□ -0.91
ZNF554-202ENST00000588534 USP31Q70CQ4 1352 aa9.38□□□□□ -0.91
ZNF554-202ENST00000588534 EYA1Q99502 592 aa9.38□□□□□ -0.91
ZNF554-202ENST00000588534 TMOD3Q9NYL9 352 aa9.37□□□□□ -0.91
ZNF554-202ENST00000588534 CLUAP1Q96AJ1 413 aa9.37□□□□□ -0.91
ZNF554-202ENST00000588534 STARD3NLO95772 234 aa9.37□□□□□ -0.91
ZNF554-202ENST00000588534 GNAI3P08754 354 aa9.37□□□□□ -0.91
ZNF554-202ENST00000588534 BRINP3Q76B58 766 aa9.37□□□□□ -0.91
ZNF554-202ENST00000588534 GTF2E1P29083 439 aaPredicted RBP9.36□□□□□ -0.91
ZNF554-202ENST00000588534 CDCA7LQ96GN5 454 aa9.36□□□□□ -0.91
ZNF554-202ENST00000588534 SPATA31A3Q5VYP0 1347 aa9.36□□□□□ -0.91
ZNF554-202ENST00000588534 GPATCH3Q96I76 525 aa9.36□□□□□ -0.91
ZNF554-202ENST00000588534 C9orf78Q9NZ63 289 aaPredicted RBP9.36□□□□□ -0.91
ZNF554-202ENST00000588534 QRICH2Q9H0J4 1663 aa9.36□□□□□ -0.91
ZNF554-202ENST00000588534 CCT4P50991 539 aaKnown RBP9.36□□□□□ -0.91
ZNF554-202ENST00000588534 SF3B2Q13435 895 aaKnown RBP9.36□□□□□ -0.91
ZNF554-202ENST00000588534 HSP90AB4PQ58FF6 505 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms