RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 CNTROBQ8N137 903 aa12.39□□□□□ -0.43
MSI2-209ENST00000579483 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
MSI2-209ENST00000579483 INTS3Q68E01 1043 aaKnown RBP12.39□□□□□ -0.43
MSI2-209ENST00000579483 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
MSI2-209ENST00000579483 TTC39AQ5SRH9 613 aa12.38□□□□□ -0.43
MSI2-209ENST00000579483 NACAP1Q9BZK3 213 aa12.38□□□□□ -0.43
MSI2-209ENST00000579483 SCAF11Q99590 1463 aaKnown RBP12.38□□□□□ -0.43
MSI2-209ENST00000579483 IKQ13123 557 aaPredicted RBP12.38□□□□□ -0.43
MSI2-209ENST00000579483 BRMS1Q9HCU9 246 aa12.38□□□□□ -0.43
MSI2-209ENST00000579483 ANO2Q9NQ90 1003 aa12.38□□□□□ -0.43
MSI2-209ENST00000579483 CEP89Q96ST8 783 aa12.37□□□□□ -0.43
MSI2-209ENST00000579483 MYL6BP14649 208 aa12.37□□□□□ -0.43
MSI2-209ENST00000579483 HSPA2P54652 639 aa12.37□□□□□ -0.43
MSI2-209ENST00000579483 NEO1Q92859 1461 aa12.37□□□□□ -0.43
MSI2-209ENST00000579483 TPM2P07951 284 aa12.37□□□□□ -0.43
MSI2-209ENST00000579483 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
MSI2-209ENST00000579483 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
MSI2-209ENST00000579483 FMNL2Q96PY5 1086 aa12.37□□□□□ -0.43
MSI2-209ENST00000579483 TAF7Q15545 349 aaPredicted RBP12.36□□□□□ -0.43
MSI2-209ENST00000579483 FSD1Q9BTV5 496 aa12.36□□□□□ -0.43
MSI2-209ENST00000579483 PHF14O94880 888 aa12.36□□□□□ -0.43
MSI2-209ENST00000579483 LARP1Q6PKG0 1096 aaKnown RBP12.36□□□□□ -0.43
MSI2-209ENST00000579483 FYB1O15117 783 aa12.36□□□□□ -0.43
MSI2-209ENST00000579483 MPRIPQ6WCQ1 1025 aa12.36□□□□□ -0.43
MSI2-209ENST00000579483 PSMA5P28066 241 aa12.36□□□□□ -0.43
MSI2-209ENST00000579483 CDCA7Q9BWT1 371 aaPredicted RBP12.36□□□□□ -0.43
MSI2-209ENST00000579483 ACEP12821 1306 aa12.36□□□□□ -0.43
MSI2-209ENST00000579483 SYCP2Q9BX26 1530 aa12.36□□□□□ -0.43
MSI2-209ENST00000579483 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.43
MSI2-209ENST00000579483 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
MSI2-209ENST00000579483 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
MSI2-209ENST00000579483 NME9Q86XW9 330 aa12.35□□□□□ -0.43
MSI2-209ENST00000579483 C8orf37Q96NL8 207 aa12.35□□□□□ -0.43
MSI2-209ENST00000579483 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
MSI2-209ENST00000579483 HOOK1Q9UJC3 728 aaKnown RBP12.35□□□□□ -0.43
MSI2-209ENST00000579483 ABCC11Q96J66 1382 aa12.35□□□□□ -0.43
MSI2-209ENST00000579483 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
MSI2-209ENST00000579483 NOL8Q76FK4 1167 aaKnown RBP12.35□□□□□ -0.43
MSI2-209ENST00000579483 CRBNQ96SW2 442 aa12.35□□□□□ -0.43
MSI2-209ENST00000579483 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
MSI2-209ENST00000579483 TRAPPC8Q9Y2L5 1435 aa12.34□□□□□ -0.43
MSI2-209ENST00000579483 KCNA6P17658 529 aa12.33□□□□□ -0.43
MSI2-209ENST00000579483 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.43
MSI2-209ENST00000579483 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
MSI2-209ENST00000579483 DDB1Q16531 1140 aa12.33□□□□□ -0.44
MSI2-209ENST00000579483 TPD52L1Q16890 204 aaPredicted RBP12.33□□□□□ -0.44
MSI2-209ENST00000579483 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
MSI2-209ENST00000579483 POLD1P28340 1107 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 PUS7Q96PZ0 661 aaKnown RBP12.32□□□□□ -0.44
MSI2-209ENST00000579483 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
MSI2-209ENST00000579483 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 AKAP2Q9Y2D5 859 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
MSI2-209ENST00000579483 MCTP1Q6DN14 999 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 SLF2Q8IX21 1173 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 CEP170Q5SW79 1584 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 RFC4P35249 363 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 PDE3AQ14432 1141 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 ZNF287Q9HBT7 754 aa12.32□□□□□ -0.44
MSI2-209ENST00000579483 CAVIN4Q5BKX8 364 aa12.31□□□□□ -0.44
MSI2-209ENST00000579483 HYPKQ9NX55 129 aa12.31□□□□□ -0.44
MSI2-209ENST00000579483 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
MSI2-209ENST00000579483 ZCRB1Q8TBF4 217 aaKnown RBP12.31□□□□□ -0.44
MSI2-209ENST00000579483 DNAJC2Q99543 621 aaKnown RBP12.31□□□□□ -0.44
MSI2-209ENST00000579483 TSR1Q2NL82 804 aaKnown RBP12.3□□□□□ -0.44
MSI2-209ENST00000579483 IFT57Q9NWB7 429 aa12.3□□□□□ -0.44
MSI2-209ENST00000579483 TRPM2O94759 1503 aa12.3□□□□□ -0.44
MSI2-209ENST00000579483 WWC2Q6AWC2 1192 aa12.3□□□□□ -0.44
MSI2-209ENST00000579483 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
MSI2-209ENST00000579483 SHANK2Q9UPX8 1470 aa12.3□□□□□ -0.44
MSI2-209ENST00000579483 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
MSI2-209ENST00000579483 ST5P78524 1137 aa12.3□□□□□ -0.44
MSI2-209ENST00000579483 TMPOP42166 694 aaKnown RBP12.29□□□□□ -0.44
MSI2-209ENST00000579483 ZSCAN29Q8IWY8 852 aaPredicted RBP12.29□□□□□ -0.44
MSI2-209ENST00000579483 ANKRD20A12PQ8NF67 263 aa12.29□□□□□ -0.44
MSI2-209ENST00000579483 CDC45O75419 566 aa12.29□□□□□ -0.44
MSI2-209ENST00000579483 DBF4Q9UBU7 674 aaPredicted RBP12.29□□□□□ -0.44
MSI2-209ENST00000579483 EXOC6Q8TAG9 804 aa12.28□□□□□ -0.44
MSI2-209ENST00000579483 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
MSI2-209ENST00000579483 TPM1P09493 284 aa12.28□□□□□ -0.44
MSI2-209ENST00000579483 CHRNA2Q15822 529 aa12.28□□□□□ -0.44
MSI2-209ENST00000579483 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
MSI2-209ENST00000579483 LNPKQ9C0E8 428 aa12.27□□□□□ -0.44
MSI2-209ENST00000579483 TRMT112Q9UI30 125 aaKnown RBP12.27□□□□□ -0.44
MSI2-209ENST00000579483 DUSP27Q5VZP5 1158 aa12.27□□□□□ -0.44
MSI2-209ENST00000579483 IL2RBP14784 551 aa12.27□□□□□ -0.45
MSI2-209ENST00000579483 LRRCC1Q9C099 1032 aa12.27□□□□□ -0.45
MSI2-209ENST00000579483 ANKIB1Q9P2G1 1089 aa12.27□□□□□ -0.45
MSI2-209ENST00000579483 CTNNA3Q9UI47 895 aa12.27□□□□□ -0.45
MSI2-209ENST00000579483 SLKQ9H2G2 1235 aaPredicted RBP12.27□□□□□ -0.45
MSI2-209ENST00000579483 RAI14Q9P0K7 980 aa12.27□□□□□ -0.45
MSI2-209ENST00000579483 CREBRFQ8IUR6 639 aa12.26□□□□□ -0.45
MSI2-209ENST00000579483 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
MSI2-209ENST00000579483 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
MSI2-209ENST00000579483 LRP2BPQ9P2M1 347 aa12.26□□□□□ -0.45
MSI2-209ENST00000579483 TPM3P06753 285 aa12.26□□□□□ -0.45
MSI2-209ENST00000579483 SNRPA1P09661 255 aaKnown RBP12.26□□□□□ -0.45
MSI2-209ENST00000579483 IFIT5Q13325 482 aaKnown RBP12.26□□□□□ -0.45
MSI2-209ENST00000579483 ATF7IPQ6VMQ6 1270 aa12.26□□□□□ -0.45
MSI2-209ENST00000579483 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms