RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 RALBP1Q15311 655 aa17.93■□□□□ 0.46
GCOM1-213ENST00000569945 USP6P35125 1406 aa17.92■□□□□ 0.46
GCOM1-213ENST00000569945 PSME1Q06323 249 aa17.92■□□□□ 0.46
GCOM1-213ENST00000569945 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
GCOM1-213ENST00000569945 TOM1O60784 492 aa17.92■□□□□ 0.46
GCOM1-213ENST00000569945 MON2Q7Z3U7 1717 aa17.91■□□□□ 0.46
GCOM1-213ENST00000569945 A0A0U1RQG5 324 aaPredicted RBP17.91■□□□□ 0.46
GCOM1-213ENST00000569945 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
GCOM1-213ENST00000569945 KNSTRNQ9Y448 316 aa17.91■□□□□ 0.46
GCOM1-213ENST00000569945 ROBO1Q9Y6N7 1651 aa17.91■□□□□ 0.46
GCOM1-213ENST00000569945 KRT28Q7Z3Y7 464 aa17.9■□□□□ 0.46
GCOM1-213ENST00000569945 NME9Q86XW9 330 aa17.9■□□□□ 0.46
GCOM1-213ENST00000569945 ZNF692Q9BU19 519 aaPredicted RBP17.9■□□□□ 0.46
GCOM1-213ENST00000569945 SSH2Q76I76 1423 aa17.9■□□□□ 0.46
GCOM1-213ENST00000569945 FGD1P98174 961 aa17.9■□□□□ 0.46
GCOM1-213ENST00000569945 TTC21BQ7Z4L5 1316 aa17.9■□□□□ 0.46
GCOM1-213ENST00000569945 INSRP06213 1382 aa17.89■□□□□ 0.46
GCOM1-213ENST00000569945 NUTM2GQ5VZR2 741 aa17.89■□□□□ 0.46
GCOM1-213ENST00000569945 SLKQ9H2G2 1235 aaPredicted RBP17.89■□□□□ 0.46
GCOM1-213ENST00000569945 GGNBP2Q9H3C7 697 aa17.89■□□□□ 0.46
GCOM1-213ENST00000569945 KIF1AQ12756 1690 aa17.89■□□□□ 0.45
GCOM1-213ENST00000569945 MRE11P49959 708 aa17.89■□□□□ 0.45
GCOM1-213ENST00000569945 BECN1Q14457 450 aa17.89■□□□□ 0.45
GCOM1-213ENST00000569945 ARXQ96QS3 562 aa17.89■□□□□ 0.45
GCOM1-213ENST00000569945 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
GCOM1-213ENST00000569945 FYB1O15117 783 aa17.88■□□□□ 0.45
GCOM1-213ENST00000569945 NRKQ7Z2Y5 1582 aa17.88■□□□□ 0.45
GCOM1-213ENST00000569945 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
GCOM1-213ENST00000569945 BLMP54132 1417 aaPredicted RBP17.87■□□□□ 0.45
GCOM1-213ENST00000569945 RGS3P49796 1198 aa17.87■□□□□ 0.45
GCOM1-213ENST00000569945 PXDNQ92626 1479 aa17.86■□□□□ 0.45
GCOM1-213ENST00000569945 NPHP3Q7Z494 1330 aa17.86■□□□□ 0.45
GCOM1-213ENST00000569945 FBLN1P23142 703 aa17.86■□□□□ 0.45
GCOM1-213ENST00000569945 MCM4P33991 863 aa17.84■□□□□ 0.45
GCOM1-213ENST00000569945 LMOD2Q6P5Q4 547 aa17.84■□□□□ 0.45
GCOM1-213ENST00000569945 NLRP13Q86W25 1043 aa17.84■□□□□ 0.45
GCOM1-213ENST00000569945 TRPM3Q9HCF6 1732 aaPredicted RBP17.84■□□□□ 0.45
GCOM1-213ENST00000569945 CGNL1Q0VF96 1302 aa17.84■□□□□ 0.45
GCOM1-213ENST00000569945 PARD3Q8TEW0 1356 aa17.84■□□□□ 0.45
GCOM1-213ENST00000569945 SEC24BO95487 1268 aa17.83■□□□□ 0.45
GCOM1-213ENST00000569945 TNNT2P45379 298 aaPredicted RBP17.83■□□□□ 0.45
GCOM1-213ENST00000569945 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.45
GCOM1-213ENST00000569945 SOS2Q07890 1332 aaPredicted RBP17.83■□□□□ 0.44
GCOM1-213ENST00000569945 NHSL1Q5SYE7 1610 aa17.83■□□□□ 0.44
GCOM1-213ENST00000569945 ABTB2Q8N961 1025 aa17.83■□□□□ 0.44
GCOM1-213ENST00000569945 PIK3C2AO00443 1686 aa17.82■□□□□ 0.44
GCOM1-213ENST00000569945 GRPEL1Q9HAV7 217 aa17.82■□□□□ 0.44
GCOM1-213ENST00000569945 GZF1Q9H116 711 aaPredicted RBP17.81■□□□□ 0.44
GCOM1-213ENST00000569945 KIF20BQ96Q89 1820 aa17.81■□□□□ 0.44
GCOM1-213ENST00000569945 SOX12O15370 315 aa17.8■□□□□ 0.44
GCOM1-213ENST00000569945 NLRP6P59044 892 aa17.8■□□□□ 0.44
GCOM1-213ENST00000569945 ISY1Q9ULR0 285 aaKnown RBP17.8■□□□□ 0.44
GCOM1-213ENST00000569945 TTC21AQ8NDW8 1320 aa17.8■□□□□ 0.44
GCOM1-213ENST00000569945 SPATA31A3Q5VYP0 1347 aa17.79■□□□□ 0.44
GCOM1-213ENST00000569945 KIAA1211Q6ZU35 1233 aa17.79■□□□□ 0.44
GCOM1-213ENST00000569945 TRAK2O60296 914 aa17.78■□□□□ 0.44
GCOM1-213ENST00000569945 MORC1Q86VD1 984 aa17.78■□□□□ 0.44
GCOM1-213ENST00000569945 CABLES1Q8TDN4 633 aa17.78■□□□□ 0.44
GCOM1-213ENST00000569945 AHDC1Q5TGY3 1603 aaPredicted RBP17.78■□□□□ 0.44
GCOM1-213ENST00000569945 RIPK4P57078 832 aa17.78■□□□□ 0.44
GCOM1-213ENST00000569945 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
GCOM1-213ENST00000569945 SBNO1A3KN83 1393 aa17.78■□□□□ 0.44
GCOM1-213ENST00000569945 NPC1L1Q9UHC9 1359 aa17.78■□□□□ 0.44
GCOM1-213ENST00000569945 ALS2Q96Q42 1657 aa17.77■□□□□ 0.44
GCOM1-213ENST00000569945 TBC1D2Q9BYX2 928 aa17.77■□□□□ 0.44
GCOM1-213ENST00000569945 TNS3Q68CZ2 1445 aa17.77■□□□□ 0.44
GCOM1-213ENST00000569945 COG3Q96JB2 828 aa17.77■□□□□ 0.43
GCOM1-213ENST00000569945 OVOS2A0A0J9YW53 1432 aa17.77■□□□□ 0.43
GCOM1-213ENST00000569945 OVOS2Q6IE36 1432 aa17.77■□□□□ 0.43
GCOM1-213ENST00000569945 PHLPP1O60346 1717 aa17.77■□□□□ 0.43
GCOM1-213ENST00000569945 TERF1P54274 439 aa17.76■□□□□ 0.43
GCOM1-213ENST00000569945 COL16A1Q07092 1604 aaPredicted RBP17.75■□□□□ 0.43
GCOM1-213ENST00000569945 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
GCOM1-213ENST00000569945 NSD2O96028 1365 aa17.74■□□□□ 0.43
GCOM1-213ENST00000569945 HSPA1LP34931 641 aa17.74■□□□□ 0.43
GCOM1-213ENST00000569945 ANKRD26Q9UPS8 1709 aa17.74■□□□□ 0.43
GCOM1-213ENST00000569945 MED1Q15648 1581 aaPredicted RBP17.74■□□□□ 0.43
GCOM1-213ENST00000569945 MAP7D2Q96T17 732 aa17.73■□□□□ 0.43
GCOM1-213ENST00000569945 PPP2R1AP30153 589 aa17.73■□□□□ 0.43
GCOM1-213ENST00000569945 RRS1Q15050 365 aaKnown RBP17.73■□□□□ 0.43
GCOM1-213ENST00000569945 SMAP1Q8IYB5 467 aaPredicted RBP17.73■□□□□ 0.43
GCOM1-213ENST00000569945 OFD1O75665 1012 aa17.72■□□□□ 0.43
GCOM1-213ENST00000569945 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
GCOM1-213ENST00000569945 TRIM44Q96DX7 344 aaPredicted RBP17.72■□□□□ 0.43
GCOM1-213ENST00000569945 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
GCOM1-213ENST00000569945 TBC1D32Q96NH3 1257 aa17.72■□□□□ 0.43
GCOM1-213ENST00000569945 EMILIN1Q9Y6C2 1016 aa17.7■□□□□ 0.42
GCOM1-213ENST00000569945 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
GCOM1-213ENST00000569945 IGHDP01880 384 aa17.69■□□□□ 0.42
GCOM1-213ENST00000569945 GCP02774 474 aa17.69■□□□□ 0.42
GCOM1-213ENST00000569945 PDE4CQ08493 712 aa17.69■□□□□ 0.42
GCOM1-213ENST00000569945 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.69■□□□□ 0.42
GCOM1-213ENST00000569945 ARHGEF10O15013 1369 aa17.69■□□□□ 0.42
GCOM1-213ENST00000569945 PNPLA6Q8IY17 1366 aa17.69■□□□□ 0.42
GCOM1-213ENST00000569945 POLKQ9UBT6 870 aa17.69■□□□□ 0.42
GCOM1-213ENST00000569945 USP54Q70EL1 1684 aa17.68■□□□□ 0.42
GCOM1-213ENST00000569945 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
GCOM1-213ENST00000569945 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
GCOM1-213ENST00000569945 MTHFSP49914 203 aa17.67■□□□□ 0.42
GCOM1-213ENST00000569945 GAS2L3Q86XJ1 694 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms