RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 DCTN1Q14203 1278 aa13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 SSH1Q8WYL5 1049 aa13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
CCNDBP1-210ENST00000566882 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
CCNDBP1-210ENST00000566882 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
CCNDBP1-210ENST00000566882 CENPQQ7L2Z9 268 aaPredicted RBP13.11□□□□□ -0.31
CCNDBP1-210ENST00000566882 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
CCNDBP1-210ENST00000566882 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
CCNDBP1-210ENST00000566882 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
CCNDBP1-210ENST00000566882 RGS3P49796 1198 aa13.09□□□□□ -0.31
CCNDBP1-210ENST00000566882 SULT6B1Q6IMI4 303 aa13.09□□□□□ -0.31
CCNDBP1-210ENST00000566882 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
CCNDBP1-210ENST00000566882 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
CCNDBP1-210ENST00000566882 TSPYL6Q8N831 410 aa13.08□□□□□ -0.32
CCNDBP1-210ENST00000566882 BACH2Q9BYV9 841 aa13.08□□□□□ -0.32
CCNDBP1-210ENST00000566882 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
CCNDBP1-210ENST00000566882 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
CCNDBP1-210ENST00000566882 ANKLE2Q86XL3 938 aa13.08□□□□□ -0.32
CCNDBP1-210ENST00000566882 MAP3K19Q56UN5 1328 aa13.07□□□□□ -0.32
CCNDBP1-210ENST00000566882 NALCNQ8IZF0 1738 aa13.07□□□□□ -0.32
CCNDBP1-210ENST00000566882 IL16Q14005 1332 aa13.07□□□□□ -0.32
CCNDBP1-210ENST00000566882 TRIM27P14373 513 aa13.07□□□□□ -0.32
CCNDBP1-210ENST00000566882 NOB1Q9ULX3 412 aaKnown RBP13.07□□□□□ -0.32
CCNDBP1-210ENST00000566882 PIK3C2AO00443 1686 aa13.06□□□□□ -0.32
CCNDBP1-210ENST00000566882 NEFMP07197 916 aa13.06□□□□□ -0.32
CCNDBP1-210ENST00000566882 USP31Q70CQ4 1352 aa13.05□□□□□ -0.32
CCNDBP1-210ENST00000566882 NBR1Q14596 966 aa13.05□□□□□ -0.32
CCNDBP1-210ENST00000566882 ZKSCAN2Q63HK3 967 aa13.05□□□□□ -0.32
CCNDBP1-210ENST00000566882 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
CCNDBP1-210ENST00000566882 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
CCNDBP1-210ENST00000566882 CHD2O14647 1828 aaKnown RBP13.05□□□□□ -0.32
CCNDBP1-210ENST00000566882 MS4A1P11836 297 aa13.04□□□□□ -0.32
CCNDBP1-210ENST00000566882 NLRP6P59044 892 aa13.04□□□□□ -0.32
CCNDBP1-210ENST00000566882 FMN2Q9NZ56 1722 aa13.04□□□□□ -0.32
CCNDBP1-210ENST00000566882 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
CCNDBP1-210ENST00000566882 FOXO3O43524 673 aa13.04□□□□□ -0.32
CCNDBP1-210ENST00000566882 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
CCNDBP1-210ENST00000566882 MCM10Q7L590 875 aa13.04□□□□□ -0.32
CCNDBP1-210ENST00000566882 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
CCNDBP1-210ENST00000566882 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
CCNDBP1-210ENST00000566882 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
CCNDBP1-210ENST00000566882 ZNF142P52746 1687 aaPredicted RBP13.03□□□□□ -0.32
CCNDBP1-210ENST00000566882 MARF1Q9Y4F3 1742 aaKnown RBP13.03□□□□□ -0.32
CCNDBP1-210ENST00000566882 ZNF853P0CG23 659 aa13.03□□□□□ -0.32
CCNDBP1-210ENST00000566882 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
CCNDBP1-210ENST00000566882 TTC21AQ8NDW8 1320 aa13.03□□□□□ -0.32
CCNDBP1-210ENST00000566882 VAMP4O75379 141 aa13.02□□□□□ -0.32
CCNDBP1-210ENST00000566882 TMEM57Q8N5G2 664 aa13.02□□□□□ -0.32
CCNDBP1-210ENST00000566882 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.33
CCNDBP1-210ENST00000566882 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
CCNDBP1-210ENST00000566882 ATF7IPQ6VMQ6 1270 aa13.02□□□□□ -0.33
CCNDBP1-210ENST00000566882 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
CCNDBP1-210ENST00000566882 ITPRIPQ8IWB1 547 aa13.01□□□□□ -0.33
CCNDBP1-210ENST00000566882 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
CCNDBP1-210ENST00000566882 PIK3R4Q99570 1358 aa13.01□□□□□ -0.33
CCNDBP1-210ENST00000566882 AMPHP49418 695 aa13.01□□□□□ -0.33
CCNDBP1-210ENST00000566882 XPCQ01831 940 aaPredicted RBP13.01□□□□□ -0.33
CCNDBP1-210ENST00000566882 C8orf34Q49A92 452 aa13□□□□□ -0.33
CCNDBP1-210ENST00000566882 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
CCNDBP1-210ENST00000566882 IPO9Q96P70 1041 aaKnown RBP13□□□□□ -0.33
CCNDBP1-210ENST00000566882 IFT57Q9NWB7 429 aa13□□□□□ -0.33
CCNDBP1-210ENST00000566882 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
CCNDBP1-210ENST00000566882 EYA1Q99502 592 aa13□□□□□ -0.33
CCNDBP1-210ENST00000566882 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
CCNDBP1-210ENST00000566882 SETD1BQ9UPS6 1966 aaKnown RBP13□□□□□ -0.33
CCNDBP1-210ENST00000566882 ANKARQ7Z5J8 1434 aa12.99□□□□□ -0.33
CCNDBP1-210ENST00000566882 GNAI1P63096 354 aa12.99□□□□□ -0.33
CCNDBP1-210ENST00000566882 ESCO1Q5FWF5 840 aa12.99□□□□□ -0.33
CCNDBP1-210ENST00000566882 CFAP44Q96MT7 982 aa12.99□□□□□ -0.33
CCNDBP1-210ENST00000566882 MTHFSDQ2M296 383 aaKnown RBP12.98□□□□□ -0.33
CCNDBP1-210ENST00000566882 ORAI2Q96SN7 254 aa12.98□□□□□ -0.33
CCNDBP1-210ENST00000566882 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
CCNDBP1-210ENST00000566882 SBNO1A3KN83 1393 aa12.98□□□□□ -0.33
CCNDBP1-210ENST00000566882 FLT4P35916 1363 aa12.98□□□□□ -0.33
CCNDBP1-210ENST00000566882 TWISTNBQ3B726 338 aaPredicted RBP12.98□□□□□ -0.33
CCNDBP1-210ENST00000566882 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
CCNDBP1-210ENST00000566882 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
CCNDBP1-210ENST00000566882 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
CCNDBP1-210ENST00000566882 HOXC9P31274 260 aa12.97□□□□□ -0.33
CCNDBP1-210ENST00000566882 ZBTB7CA1YPR0 619 aa12.97□□□□□ -0.33
CCNDBP1-210ENST00000566882 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
CCNDBP1-210ENST00000566882 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
CCNDBP1-210ENST00000566882 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.34
CCNDBP1-210ENST00000566882 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
CCNDBP1-210ENST00000566882 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
CCNDBP1-210ENST00000566882 FAM161AQ3B820 660 aa12.95□□□□□ -0.34
CCNDBP1-210ENST00000566882 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
CCNDBP1-210ENST00000566882 KIF16BQ96L93 1317 aa12.95□□□□□ -0.34
CCNDBP1-210ENST00000566882 ADGRL3Q9HAR2 1447 aa12.95□□□□□ -0.34
CCNDBP1-210ENST00000566882 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
CCNDBP1-210ENST00000566882 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
CCNDBP1-210ENST00000566882 PSME1Q06323 249 aa12.94□□□□□ -0.34
CCNDBP1-210ENST00000566882 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
CCNDBP1-210ENST00000566882 SEC24BO95487 1268 aa12.94□□□□□ -0.34
CCNDBP1-210ENST00000566882 DDX19BQ9UMR2 479 aa12.94□□□□□ -0.34
CCNDBP1-210ENST00000566882 CHL1O00533 1208 aa12.93□□□□□ -0.34
CCNDBP1-210ENST00000566882 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
CCNDBP1-210ENST00000566882 IPO8O15397 1037 aaKnown RBP12.93□□□□□ -0.34
CCNDBP1-210ENST00000566882 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms