RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 ADAMTSL3P82987 1691 aa22.24■■□□□ 1.15
KLHDC4-217ENST00000566661 SLC4A3P48751 1232 aa22.23■■□□□ 1.15
KLHDC4-217ENST00000566661 TSR2Q969E8 191 aaKnown RBP22.23■■□□□ 1.15
KLHDC4-217ENST00000566661 USP19O94966 1318 aa22.23■■□□□ 1.15
KLHDC4-217ENST00000566661 RGPD8O14715 1765 aaPredicted RBP22.22■■□□□ 1.15
KLHDC4-217ENST00000566661 GSE1Q14687 1217 aa22.22■■□□□ 1.15
KLHDC4-217ENST00000566661 ANKLE2Q86XL3 938 aa22.21■■□□□ 1.15
KLHDC4-217ENST00000566661 PHACTR3Q96KR7 559 aa22.21■■□□□ 1.15
KLHDC4-217ENST00000566661 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
KLHDC4-217ENST00000566661 BCL2L13Q9BXK5 485 aa22.19■■□□□ 1.14
KLHDC4-217ENST00000566661 OVOS2A0A0J9YW53 1432 aa22.19■■□□□ 1.14
KLHDC4-217ENST00000566661 OVOS2Q6IE36 1432 aa22.19■■□□□ 1.14
KLHDC4-217ENST00000566661 SSH2Q76I76 1423 aa22.19■■□□□ 1.14
KLHDC4-217ENST00000566661 PIK3R4Q99570 1358 aa22.18■■□□□ 1.14
KLHDC4-217ENST00000566661 RLBP1P12271 317 aa22.18■■□□□ 1.14
KLHDC4-217ENST00000566661 ZNF142P52746 1687 aaPredicted RBP22.18■■□□□ 1.14
KLHDC4-217ENST00000566661 BECN1Q14457 450 aa22.18■■□□□ 1.14
KLHDC4-217ENST00000566661 DNAJC5Q9H3Z4 198 aa22.18■■□□□ 1.14
KLHDC4-217ENST00000566661 PCDHB15Q9Y5E8 787 aa22.18■■□□□ 1.14
KLHDC4-217ENST00000566661 NGDNQ8NEJ9 315 aaKnown RBP22.17■■□□□ 1.14
KLHDC4-217ENST00000566661 MVPQ14764 893 aaKnown RBP22.16■■□□□ 1.14
KLHDC4-217ENST00000566661 ZKSCAN2Q63HK3 967 aa22.16■■□□□ 1.14
KLHDC4-217ENST00000566661 IL16Q14005 1332 aa22.16■■□□□ 1.14
KLHDC4-217ENST00000566661 EXOSC9Q06265 439 aaKnown RBP22.16■■□□□ 1.14
KLHDC4-217ENST00000566661 SOX12O15370 315 aa22.14■■□□□ 1.14
KLHDC4-217ENST00000566661 NFE2L2Q16236 605 aa22.14■■□□□ 1.14
KLHDC4-217ENST00000566661 UPF2Q9HAU5 1272 aaKnown RBP22.14■■□□□ 1.14
KLHDC4-217ENST00000566661 TNNQ9UQP3 1299 aa22.14■■□□□ 1.14
KLHDC4-217ENST00000566661 SETD1BQ9UPS6 1966 aaKnown RBP22.13■■□□□ 1.13
KLHDC4-217ENST00000566661 RBM33Q96EV2 1170 aaKnown RBP22.13■■□□□ 1.13
KLHDC4-217ENST00000566661 CHD2O14647 1828 aaKnown RBP22.13■■□□□ 1.13
KLHDC4-217ENST00000566661 NALCNQ8IZF0 1738 aa22.13■■□□□ 1.13
KLHDC4-217ENST00000566661 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
KLHDC4-217ENST00000566661 PDZRN3Q9UPQ7 1066 aa22.12■■□□□ 1.13
KLHDC4-217ENST00000566661 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
KLHDC4-217ENST00000566661 USP31Q70CQ4 1352 aa22.12■■□□□ 1.13
KLHDC4-217ENST00000566661 EIF4A2Q14240 407 aaKnown RBP22.12■■□□□ 1.13
KLHDC4-217ENST00000566661 FMN2Q9NZ56 1722 aa22.1■■□□□ 1.13
KLHDC4-217ENST00000566661 ANKARQ7Z5J8 1434 aa22.1■■□□□ 1.13
KLHDC4-217ENST00000566661 SEC24BO95487 1268 aa22.1■■□□□ 1.13
KLHDC4-217ENST00000566661 FTSJ3Q8IY81 847 aaKnown RBP22.1■■□□□ 1.13
KLHDC4-217ENST00000566661 THUMPD2Q9BTF0 503 aaKnown RBP22.1■■□□□ 1.13
KLHDC4-217ENST00000566661 PEAK1Q9H792 1746 aa22.1■■□□□ 1.13
KLHDC4-217ENST00000566661 HSP90AB2PQ58FF8 381 aa22.09■■□□□ 1.13
KLHDC4-217ENST00000566661 TBC1D32Q96NH3 1257 aa22.08■■□□□ 1.13
KLHDC4-217ENST00000566661 AEBP1Q8IUX7 1158 aa22.08■■□□□ 1.13
KLHDC4-217ENST00000566661 HDAC1Q13547 482 aaPredicted RBP22.07■■□□□ 1.12
KLHDC4-217ENST00000566661 DDX19BQ9UMR2 479 aa22.07■■□□□ 1.12
KLHDC4-217ENST00000566661 FRAT2O75474 233 aaPredicted RBP22.07■■□□□ 1.12
KLHDC4-217ENST00000566661 PIK3C2AO00443 1686 aa22.06■■□□□ 1.12
KLHDC4-217ENST00000566661 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
KLHDC4-217ENST00000566661 SULT6B1Q6IMI4 303 aa22.06■■□□□ 1.12
KLHDC4-217ENST00000566661 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
KLHDC4-217ENST00000566661 SMC4Q9NTJ3 1288 aa22.06■■□□□ 1.12
KLHDC4-217ENST00000566661 DLG5Q8TDM6 1919 aa22.05■■□□□ 1.12
KLHDC4-217ENST00000566661 NUTM2GQ5VZR2 741 aa22.04■■□□□ 1.12
KLHDC4-217ENST00000566661 NPHP4O75161 1426 aaPredicted RBP22.04■■□□□ 1.12
KLHDC4-217ENST00000566661 NLRP6P59044 892 aa22.03■■□□□ 1.12
KLHDC4-217ENST00000566661 ATF7IPQ6VMQ6 1270 aa22.03■■□□□ 1.12
KLHDC4-217ENST00000566661 TRIM27P14373 513 aa22.03■■□□□ 1.12
KLHDC4-217ENST00000566661 KIF16BQ96L93 1317 aa22.02■■□□□ 1.12
KLHDC4-217ENST00000566661 FAM83GA6ND36 823 aa22.02■■□□□ 1.12
KLHDC4-217ENST00000566661 IL27Q8NEV9 243 aa22.02■■□□□ 1.11
KLHDC4-217ENST00000566661 ZNF428Q96B54 188 aa22.01■■□□□ 1.11
KLHDC4-217ENST00000566661 IPO8O15397 1037 aaKnown RBP22■■□□□ 1.11
KLHDC4-217ENST00000566661 CALD1Q05682 793 aaKnown RBP22■■□□□ 1.11
KLHDC4-217ENST00000566661 DCTN1Q14203 1278 aa22■■□□□ 1.11
KLHDC4-217ENST00000566661 ALDH1L2Q3SY69 923 aa22■■□□□ 1.11
KLHDC4-217ENST00000566661 PHF8Q9UPP1 1060 aa22■■□□□ 1.11
KLHDC4-217ENST00000566661 RGPD1P0DJD0 1748 aa21.99■■□□□ 1.11
KLHDC4-217ENST00000566661 SBNO1A3KN83 1393 aa21.99■■□□□ 1.11
KLHDC4-217ENST00000566661 ZNF853P0CG23 659 aa21.99■■□□□ 1.11
KLHDC4-217ENST00000566661 SMC5Q8IY18 1101 aa21.99■■□□□ 1.11
KLHDC4-217ENST00000566661 ANTXR1Q9H6X2 564 aa21.99■■□□□ 1.11
KLHDC4-217ENST00000566661 IFT57Q9NWB7 429 aa21.99■■□□□ 1.11
KLHDC4-217ENST00000566661 AMPHP49418 695 aa21.98■■□□□ 1.11
KLHDC4-217ENST00000566661 GNAI1P63096 354 aa21.98■■□□□ 1.11
KLHDC4-217ENST00000566661 LMOD3Q0VAK6 560 aa21.98■■□□□ 1.11
KLHDC4-217ENST00000566661 ABTB2Q8N961 1025 aa21.98■■□□□ 1.11
KLHDC4-217ENST00000566661 NOB1Q9ULX3 412 aaKnown RBP21.98■■□□□ 1.11
KLHDC4-217ENST00000566661 FLT4P35916 1363 aa21.98■■□□□ 1.11
KLHDC4-217ENST00000566661 BRPF1P55201 1214 aaPredicted RBP21.98■■□□□ 1.11
KLHDC4-217ENST00000566661 MBIPQ9NS73 344 aa21.98■■□□□ 1.11
KLHDC4-217ENST00000566661 ADGRL3Q9HAR2 1447 aa21.97■■□□□ 1.11
KLHDC4-217ENST00000566661 MARF1Q9Y4F3 1742 aaKnown RBP21.97■■□□□ 1.11
KLHDC4-217ENST00000566661 ITPRIPQ8IWB1 547 aa21.96■■□□□ 1.11
KLHDC4-217ENST00000566661 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
KLHDC4-217ENST00000566661 ESCO1Q5FWF5 840 aa21.95■■□□□ 1.1
KLHDC4-217ENST00000566661 C14orf37Q86TY3 774 aa21.95■■□□□ 1.1
KLHDC4-217ENST00000566661 CFAP44Q96MT7 982 aa21.95■■□□□ 1.1
KLHDC4-217ENST00000566661 TBC1D2Q9BYX2 928 aa21.95■■□□□ 1.1
KLHDC4-217ENST00000566661 ZBTB40Q9NUA8 1239 aa21.95■■□□□ 1.1
KLHDC4-217ENST00000566661 VAMP4O75379 141 aa21.94■■□□□ 1.1
KLHDC4-217ENST00000566661 ELL2O00472 640 aaPredicted RBP21.94■■□□□ 1.1
KLHDC4-217ENST00000566661 ARHGEF10O15013 1369 aa21.93■■□□□ 1.1
KLHDC4-217ENST00000566661 EYA1Q99502 592 aa21.92■■□□□ 1.1
KLHDC4-217ENST00000566661 CHMP4BQ9H444 224 aaKnown RBP21.92■■□□□ 1.1
KLHDC4-217ENST00000566661 TMEM57Q8N5G2 664 aa21.92■■□□□ 1.1
KLHDC4-217ENST00000566661 HOXC9P31274 260 aa21.91■■□□□ 1.1
KLHDC4-217ENST00000566661 MCM10Q7L590 875 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms