RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
LINC01541-201ENST00000566582 IGHDP01880 384 aa11.21□□□□□ -0.61
LINC01541-201ENST00000566582 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
LINC01541-201ENST00000566582 SSH1Q8WYL5 1049 aa11.21□□□□□ -0.61
LINC01541-201ENST00000566582 TTC21AQ8NDW8 1320 aa11.21□□□□□ -0.61
LINC01541-201ENST00000566582 EIF4A2Q14240 407 aaKnown RBP11.21□□□□□ -0.61
LINC01541-201ENST00000566582 SULT6B1Q6IMI4 303 aa11.21□□□□□ -0.61
LINC01541-201ENST00000566582 NRKQ7Z2Y5 1582 aa11.21□□□□□ -0.62
LINC01541-201ENST00000566582 OVOS2A0A0J9YW53 1432 aa11.21□□□□□ -0.62
LINC01541-201ENST00000566582 OVOS2Q6IE36 1432 aa11.21□□□□□ -0.62
LINC01541-201ENST00000566582 AAMPQ13685 434 aa11.2□□□□□ -0.62
LINC01541-201ENST00000566582 GNAI1P63096 354 aa11.2□□□□□ -0.62
LINC01541-201ENST00000566582 MVPQ14764 893 aaKnown RBP11.2□□□□□ -0.62
LINC01541-201ENST00000566582 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
LINC01541-201ENST00000566582 PIK3R4Q99570 1358 aa11.19□□□□□ -0.62
LINC01541-201ENST00000566582 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
LINC01541-201ENST00000566582 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
LINC01541-201ENST00000566582 IPO8O15397 1037 aaKnown RBP11.19□□□□□ -0.62
LINC01541-201ENST00000566582 ATF7IPQ6VMQ6 1270 aa11.19□□□□□ -0.62
LINC01541-201ENST00000566582 C14orf37Q86TY3 774 aa11.19□□□□□ -0.62
LINC01541-201ENST00000566582 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
LINC01541-201ENST00000566582 RGPD8O14715 1765 aaPredicted RBP11.19□□□□□ -0.62
LINC01541-201ENST00000566582 KIF16BQ96L93 1317 aa11.19□□□□□ -0.62
LINC01541-201ENST00000566582 TRIM27P14373 513 aa11.18□□□□□ -0.62
LINC01541-201ENST00000566582 AMPHP49418 695 aa11.18□□□□□ -0.62
LINC01541-201ENST00000566582 NLRP6P59044 892 aa11.18□□□□□ -0.62
LINC01541-201ENST00000566582 NUTM2GQ5VZR2 741 aa11.18□□□□□ -0.62
LINC01541-201ENST00000566582 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
LINC01541-201ENST00000566582 RBM33Q96EV2 1170 aaKnown RBP11.18□□□□□ -0.62
LINC01541-201ENST00000566582 IPO9Q96P70 1041 aaKnown RBP11.18□□□□□ -0.62
LINC01541-201ENST00000566582 XRN1Q8IZH2 1706 aaKnown RBP11.18□□□□□ -0.62
LINC01541-201ENST00000566582 FAM83GA6ND36 823 aa11.18□□□□□ -0.62
LINC01541-201ENST00000566582 ELL2O00472 640 aaPredicted RBP11.18□□□□□ -0.62
LINC01541-201ENST00000566582 IFT57Q9NWB7 429 aa11.18□□□□□ -0.62
LINC01541-201ENST00000566582 DCTN1Q14203 1278 aa11.17□□□□□ -0.62
LINC01541-201ENST00000566582 NOP58Q9Y2X3 529 aaKnown RBP11.17□□□□□ -0.62
LINC01541-201ENST00000566582 PCDHB15Q9Y5E8 787 aa11.17□□□□□ -0.62
LINC01541-201ENST00000566582 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
LINC01541-201ENST00000566582 USP31Q70CQ4 1352 aa11.17□□□□□ -0.62
LINC01541-201ENST00000566582 SSH2Q76I76 1423 aa11.17□□□□□ -0.62
LINC01541-201ENST00000566582 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
LINC01541-201ENST00000566582 RWDD1Q9H446 243 aaPredicted RBP11.17□□□□□ -0.62
LINC01541-201ENST00000566582 MBIPQ9NS73 344 aa11.17□□□□□ -0.62
LINC01541-201ENST00000566582 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
LINC01541-201ENST00000566582 ANKARQ7Z5J8 1434 aa11.16□□□□□ -0.62
LINC01541-201ENST00000566582 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
LINC01541-201ENST00000566582 ABTB2Q8N961 1025 aa11.16□□□□□ -0.62
LINC01541-201ENST00000566582 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
LINC01541-201ENST00000566582 DDX19BQ9UMR2 479 aa11.16□□□□□ -0.62
LINC01541-201ENST00000566582 ZNF428Q96B54 188 aa11.16□□□□□ -0.62
LINC01541-201ENST00000566582 FLT4P35916 1363 aa11.15□□□□□ -0.62
LINC01541-201ENST00000566582 TWISTNBQ3B726 338 aaPredicted RBP11.15□□□□□ -0.63
LINC01541-201ENST00000566582 TSPYL6Q8N831 410 aa11.15□□□□□ -0.63
LINC01541-201ENST00000566582 NALCNQ8IZF0 1738 aa11.15□□□□□ -0.63
LINC01541-201ENST00000566582 VAMP4O75379 141 aa11.14□□□□□ -0.63
LINC01541-201ENST00000566582 TMEM57Q8N5G2 664 aa11.14□□□□□ -0.63
LINC01541-201ENST00000566582 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
LINC01541-201ENST00000566582 SBNO1A3KN83 1393 aa11.14□□□□□ -0.63
LINC01541-201ENST00000566582 DLG5Q8TDM6 1919 aa11.14□□□□□ -0.63
LINC01541-201ENST00000566582 ZNF853P0CG23 659 aa11.14□□□□□ -0.63
LINC01541-201ENST00000566582 MYT1Q01538 1121 aa11.14□□□□□ -0.63
LINC01541-201ENST00000566582 PEAK1Q9H792 1746 aa11.13□□□□□ -0.63
LINC01541-201ENST00000566582 ESCO1Q5FWF5 840 aa11.13□□□□□ -0.63
LINC01541-201ENST00000566582 MCM10Q7L590 875 aa11.13□□□□□ -0.63
LINC01541-201ENST00000566582 FMN2Q9NZ56 1722 aa11.13□□□□□ -0.63
LINC01541-201ENST00000566582 ZNF142P52746 1687 aaPredicted RBP11.13□□□□□ -0.63
LINC01541-201ENST00000566582 ADAMTSL3P82987 1691 aa11.12□□□□□ -0.63
LINC01541-201ENST00000566582 C8orf34Q49A92 452 aa11.12□□□□□ -0.63
LINC01541-201ENST00000566582 C8orf58Q8NAV2 365 aa11.12□□□□□ -0.63
LINC01541-201ENST00000566582 RTF1Q92541 710 aaKnown RBP11.12□□□□□ -0.63
LINC01541-201ENST00000566582 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
LINC01541-201ENST00000566582 PIK3C2AO00443 1686 aa11.12□□□□□ -0.63
LINC01541-201ENST00000566582 CHD2O14647 1828 aaKnown RBP11.12□□□□□ -0.63
LINC01541-201ENST00000566582 PSME1Q06323 249 aa11.11□□□□□ -0.63
LINC01541-201ENST00000566582 ARHGEF10O15013 1369 aa11.11□□□□□ -0.63
LINC01541-201ENST00000566582 LTV1Q96GA3 475 aaPredicted RBP11.11□□□□□ -0.63
LINC01541-201ENST00000566582 PDZRN3Q9UPQ7 1066 aa11.11□□□□□ -0.63
LINC01541-201ENST00000566582 NPHP4O75161 1426 aaPredicted RBP11.11□□□□□ -0.63
LINC01541-201ENST00000566582 MRPL50Q8N5N7 158 aaKnown RBP11.1□□□□□ -0.63
LINC01541-201ENST00000566582 EYA1Q99502 592 aa11.1□□□□□ -0.63
LINC01541-201ENST00000566582 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
LINC01541-201ENST00000566582 HOXC9P31274 260 aa11.1□□□□□ -0.63
LINC01541-201ENST00000566582 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
LINC01541-201ENST00000566582 PLEKHG5O94827 1062 aa11.09□□□□□ -0.63
LINC01541-201ENST00000566582 KCNA4P22459 653 aa11.09□□□□□ -0.63
LINC01541-201ENST00000566582 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
LINC01541-201ENST00000566582 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
LINC01541-201ENST00000566582 FOXO3O43524 673 aa11.09□□□□□ -0.63
LINC01541-201ENST00000566582 ARHGAP45Q92619 1136 aa11.09□□□□□ -0.63
LINC01541-201ENST00000566582 DDRGK1Q96HY6 314 aa11.09□□□□□ -0.63
LINC01541-201ENST00000566582 CHMP4BQ9H444 224 aaKnown RBP11.09□□□□□ -0.63
LINC01541-201ENST00000566582 ZBTB40Q9NUA8 1239 aa11.09□□□□□ -0.63
LINC01541-201ENST00000566582 ADGRL3Q9HAR2 1447 aa11.08□□□□□ -0.64
LINC01541-201ENST00000566582 IGSF1Q8N6C5 1336 aa11.08□□□□□ -0.64
LINC01541-201ENST00000566582 RGPD1P0DJD0 1748 aa11.08□□□□□ -0.64
LINC01541-201ENST00000566582 CHL1O00533 1208 aa11.08□□□□□ -0.64
LINC01541-201ENST00000566582 LMOD2Q6P5Q4 547 aa11.08□□□□□ -0.64
LINC01541-201ENST00000566582 GAS2L2Q8NHY3 880 aa11.08□□□□□ -0.64
LINC01541-201ENST00000566582 HDAC1Q13547 482 aaPredicted RBP11.07□□□□□ -0.64
LINC01541-201ENST00000566582 KRT24Q2M2I5 525 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms