RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, human

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRTC3-209	ENST00000560320	NPHP3	Q7Z494	1330 aa		13.96	□□□□□ -0.17
CRTC3-209	ENST00000560320	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.96	□□□□□ -0.17
CRTC3-209	ENST00000560320	NUTM2E	B1AL46	878 aa	Predicted RBP	13.96	□□□□□ -0.17
CRTC3-209	ENST00000560320	NUTM2G	Q5VZR2	741 aa		13.96	□□□□□ -0.17
CRTC3-209	ENST00000560320	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.96	□□□□□ -0.17
CRTC3-209	ENST00000560320	KCNH5	Q8NCM2	988 aa		13.96	□□□□□ -0.17
CRTC3-209	ENST00000560320	SBNO1	A3KN83	1393 aa		13.96	□□□□□ -0.18
CRTC3-209	ENST00000560320	FLT4	P35916	1363 aa		13.96	□□□□□ -0.18
CRTC3-209	ENST00000560320	KIF24	Q5T7B8	1368 aa		13.96	□□□□□ -0.18
CRTC3-209	ENST00000560320	FCHSD2	O94868	740 aa		13.95	□□□□□ -0.18
CRTC3-209	ENST00000560320	GOLGA2	Q08379	1002 aa		13.95	□□□□□ -0.18
CRTC3-209	ENST00000560320	NCBP3	Q53F19	620 aa	Known RBP	13.95	□□□□□ -0.18
CRTC3-209	ENST00000560320	LMOD2	Q6P5Q4	547 aa		13.95	□□□□□ -0.18
CRTC3-209	ENST00000560320	TCP11L2	Q8N4U5	519 aa		13.94	□□□□□ -0.18
CRTC3-209	ENST00000560320	PEAK1	Q9H792	1746 aa		13.94	□□□□□ -0.18
CRTC3-209	ENST00000560320	ALS2	Q96Q42	1657 aa		13.94	□□□□□ -0.18
CRTC3-209	ENST00000560320	MAP3K19	Q56UN5	1328 aa		13.93	□□□□□ -0.18
CRTC3-209	ENST00000560320	IL13	P35225	146 aa		13.93	□□□□□ -0.18
CRTC3-209	ENST00000560320	XPC	Q01831	940 aa	Predicted RBP	13.93	□□□□□ -0.18
CRTC3-209	ENST00000560320	AFF2	P51816	1311 aa		13.92	□□□□□ -0.18
CRTC3-209	ENST00000560320	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.92	□□□□□ -0.18
CRTC3-209	ENST00000560320	RTL1	A6NKG5	1358 aa		13.92	□□□□□ -0.18
CRTC3-209	ENST00000560320	RBM6	P78332	1123 aa	Known RBP	13.91	□□□□□ -0.18
CRTC3-209	ENST00000560320	NEUROD2	Q15784	382 aa		13.91	□□□□□ -0.18
CRTC3-209	ENST00000560320	SLAIN2	Q9P270	581 aa		13.91	□□□□□ -0.18
CRTC3-209	ENST00000560320		E9PSI1	815 aa		13.9	□□□□□ -0.18
CRTC3-209	ENST00000560320	PRKAR2B	P31323	418 aa		13.9	□□□□□ -0.18
CRTC3-209	ENST00000560320	EIF4A2	Q14240	407 aa	Known RBP	13.9	□□□□□ -0.18
CRTC3-209	ENST00000560320	CCDC27	Q2M243	656 aa		13.9	□□□□□ -0.18
CRTC3-209	ENST00000560320	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.9	□□□□□ -0.19
CRTC3-209	ENST00000560320	SLIT3	O75094	1523 aa		13.9	□□□□□ -0.19
CRTC3-209	ENST00000560320	ZNF521	Q96K83	1311 aa		13.9	□□□□□ -0.19
CRTC3-209	ENST00000560320	ARHGEF10	O15013	1369 aa		13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	HMOX1	P09601	288 aa		13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	PLEKHF1	Q96S99	279 aa		13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	RSPH6A	Q9H0K4	717 aa		13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	RRP7A	Q9Y3A4	280 aa	Known RBP	13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	RGPD1	P0DJD0	1748 aa		13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	NFAT5	O94916	1531 aa		13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	TNS3	Q68CZ2	1445 aa		13.89	□□□□□ -0.19
CRTC3-209	ENST00000560320	ZBTB7C	A1YPR0	619 aa		13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	HOXC9	P31274	260 aa		13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	TMPO	P42166	694 aa	Known RBP	13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	HSP90AB2P	Q58FF8	381 aa		13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	BRINP3	Q76B58	766 aa		13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	WDR63	Q8IWG1	891 aa		13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	WWC1	Q8IX03	1113 aa		13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	CDCA7L	Q96GN5	454 aa		13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	DLG5	Q8TDM6	1919 aa		13.88	□□□□□ -0.19
CRTC3-209	ENST00000560320	PXDN	Q92626	1479 aa		13.87	□□□□□ -0.19
CRTC3-209	ENST00000560320	GC	P02774	474 aa		13.87	□□□□□ -0.19
CRTC3-209	ENST00000560320	SLFN5	Q08AF3	891 aa		13.87	□□□□□ -0.19
CRTC3-209	ENST00000560320	LMOD3	Q0VAK6	560 aa		13.87	□□□□□ -0.19
CRTC3-209	ENST00000560320	USP19	O94966	1318 aa		13.87	□□□□□ -0.19
CRTC3-209	ENST00000560320	RIPK4	P57078	832 aa		13.86	□□□□□ -0.19
CRTC3-209	ENST00000560320	FKBP8	Q14318	412 aa		13.86	□□□□□ -0.19
CRTC3-209	ENST00000560320	SULT6B1	Q6IMI4	303 aa		13.86	□□□□□ -0.19
CRTC3-209	ENST00000560320	IP6K1	Q92551	441 aa		13.86	□□□□□ -0.19
CRTC3-209	ENST00000560320	QTRT2	Q9H974	415 aa	Known RBP	13.86	□□□□□ -0.19
CRTC3-209	ENST00000560320	RCAN3	Q9UKA8	241 aa		13.86	□□□□□ -0.19
CRTC3-209	ENST00000560320	NHSL1	Q5SYE7	1610 aa		13.86	□□□□□ -0.19
CRTC3-209	ENST00000560320	PLEKHG5	O94827	1062 aa		13.85	□□□□□ -0.19
CRTC3-209	ENST00000560320	CALD1	Q05682	793 aa	Known RBP	13.85	□□□□□ -0.19
CRTC3-209	ENST00000560320	NFE2L2	Q16236	605 aa		13.85	□□□□□ -0.19
CRTC3-209	ENST00000560320	MYH16	Q9H6N6	1097 aa		13.85	□□□□□ -0.19
CRTC3-209	ENST00000560320	SPATA31A3	Q5VYP0	1347 aa		13.85	□□□□□ -0.19
CRTC3-209	ENST00000560320	DDX17	Q92841	729 aa	Known RBP	13.84	□□□□□ -0.19
CRTC3-209	ENST00000560320	DUSP27	Q5VZP5	1158 aa		13.83	□□□□□ -0.2
CRTC3-209	ENST00000560320	LTV1	Q96GA3	475 aa	Predicted RBP	13.83	□□□□□ -0.2
CRTC3-209	ENST00000560320	RGPD5	Q99666	1765 aa		13.83	□□□□□ -0.2
CRTC3-209	ENST00000560320	ERICH6B	Q5W0A0	696 aa		13.82	□□□□□ -0.2
CRTC3-209	ENST00000560320	ARHGEF25	Q86VW2	580 aa		13.82	□□□□□ -0.2
CRTC3-209	ENST00000560320	CCDC125	Q86Z20	511 aa		13.82	□□□□□ -0.2
CRTC3-209	ENST00000560320	IL16	Q14005	1332 aa		13.82	□□□□□ -0.2
CRTC3-209	ENST00000560320	IGSF1	Q8N6C5	1336 aa		13.82	□□□□□ -0.2
CRTC3-209	ENST00000560320	CRYBG1	Q9Y4K1	1723 aa		13.81	□□□□□ -0.2
CRTC3-209	ENST00000560320	HAP1	P54257	671 aa	Predicted RBP	13.81	□□□□□ -0.2
CRTC3-209	ENST00000560320	TRMT2A	Q8IZ69	625 aa	Known RBP	13.81	□□□□□ -0.2
CRTC3-209	ENST00000560320	NGLY1	Q96IV0	654 aa		13.81	□□□□□ -0.2
CRTC3-209	ENST00000560320	EYA1	Q99502	592 aa		13.81	□□□□□ -0.2
CRTC3-209	ENST00000560320	SOS2	Q07890	1332 aa	Predicted RBP	13.81	□□□□□ -0.2
CRTC3-209	ENST00000560320	RGPD2	P0DJD1	1756 aa		13.81	□□□□□ -0.2
CRTC3-209	ENST00000560320	ABCC6	O95255	1503 aa		13.8	□□□□□ -0.2
CRTC3-209	ENST00000560320	FAM208A	Q9UK61	1670 aa	Known RBP	13.8	□□□□□ -0.2
CRTC3-209	ENST00000560320	YY1	P25490	414 aa		13.8	□□□□□ -0.2
CRTC3-209	ENST00000560320	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.8	□□□□□ -0.2
CRTC3-209	ENST00000560320	ZC3H6	P61129	1189 aa	Known RBP	13.79	□□□□□ -0.2
CRTC3-209	ENST00000560320	AEBP1	Q8IUX7	1158 aa		13.79	□□□□□ -0.2
CRTC3-209	ENST00000560320	GAS2L2	Q8NHY3	880 aa		13.79	□□□□□ -0.2
CRTC3-209	ENST00000560320	PHACTR3	Q96KR7	559 aa		13.79	□□□□□ -0.2
CRTC3-209	ENST00000560320	TRIM35	Q9UPQ4	493 aa		13.79	□□□□□ -0.2
CRTC3-209	ENST00000560320	KDR	P35968	1356 aa		13.79	□□□□□ -0.2
CRTC3-209	ENST00000560320	C8orf37	Q96NL8	207 aa		13.78	□□□□□ -0.2
CRTC3-209	ENST00000560320	RNF123	Q5XPI4	1314 aa		13.78	□□□□□ -0.2
CRTC3-209	ENST00000560320	RRP1	P56182	461 aa	Known RBP	13.77	□□□□□ -0.21
CRTC3-209	ENST00000560320	ANKRD24	Q8TF21	1146 aa		13.77	□□□□□ -0.21
CRTC3-209	ENST00000560320	ABCA3	Q99758	1704 aa		13.77	□□□□□ -0.21
CRTC3-209	ENST00000560320	GNAI1	P63096	354 aa		13.76	□□□□□ -0.21
CRTC3-209	ENST00000560320	IRX6	P78412	446 aa	Predicted RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms