RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NSD2O96028 1365 aa18.09■□□□□ 0.49
ARHGEF40-207ENST00000556399 SYCP2Q9BX26 1530 aa18.09■□□□□ 0.49
ARHGEF40-207ENST00000556399 A2MP01023 1474 aa18.09■□□□□ 0.49
ARHGEF40-207ENST00000556399 CARD14Q9BXL6 1004 aa18.08■□□□□ 0.49
ARHGEF40-207ENST00000556399 GAS2L2Q8NHY3 880 aa18.08■□□□□ 0.48
ARHGEF40-207ENST00000556399 IL16Q14005 1332 aa18.07■□□□□ 0.48
ARHGEF40-207ENST00000556399 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
ARHGEF40-207ENST00000556399 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
ARHGEF40-207ENST00000556399 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
ARHGEF40-207ENST00000556399 NEXNQ0ZGT2 675 aa18.07■□□□□ 0.48
ARHGEF40-207ENST00000556399 KLHL40Q2TBA0 621 aa18.07■□□□□ 0.48
ARHGEF40-207ENST00000556399 DUOX2Q9NRD8 1548 aa18.07■□□□□ 0.48
ARHGEF40-207ENST00000556399 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
ARHGEF40-207ENST00000556399 TXNDC2Q86VQ3 553 aa18.06■□□□□ 0.48
ARHGEF40-207ENST00000556399 SPC24Q8NBT2 197 aa18.06■□□□□ 0.48
ARHGEF40-207ENST00000556399 SNX21Q969T3 373 aa18.06■□□□□ 0.48
ARHGEF40-207ENST00000556399 EXOC6BQ9Y2D4 811 aa18.06■□□□□ 0.48
ARHGEF40-207ENST00000556399 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
ARHGEF40-207ENST00000556399 XPCQ01831 940 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF40-207ENST00000556399 TRIM5Q9C035 493 aa18.05■□□□□ 0.48
ARHGEF40-207ENST00000556399 MAP4K4O95819 1239 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF40-207ENST00000556399 CHMP4CQ96CF2 233 aa18.05■□□□□ 0.48
ARHGEF40-207ENST00000556399 TAF7LQ5H9L4 462 aa18.05■□□□□ 0.48
ARHGEF40-207ENST00000556399 PSMA5P28066 241 aa18.04■□□□□ 0.48
ARHGEF40-207ENST00000556399 KDM5CP41229 1560 aa18.04■□□□□ 0.48
ARHGEF40-207ENST00000556399 SRCIN1Q9C0H9 1055 aa18.04■□□□□ 0.48
ARHGEF40-207ENST00000556399 FOSBP53539 338 aa18.04■□□□□ 0.48
ARHGEF40-207ENST00000556399 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
ARHGEF40-207ENST00000556399 BCL11BQ9C0K0 894 aaPredicted RBP18.04■□□□□ 0.48
ARHGEF40-207ENST00000556399 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
ARHGEF40-207ENST00000556399 RRAGDQ9NQL2 400 aaPredicted RBP18.03■□□□□ 0.48
ARHGEF40-207ENST00000556399 DISP1Q96F81 1524 aa18.03■□□□□ 0.48
ARHGEF40-207ENST00000556399 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
ARHGEF40-207ENST00000556399 UPF3BQ9BZI7 483 aaKnown RBP18.03■□□□□ 0.48
ARHGEF40-207ENST00000556399 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
ARHGEF40-207ENST00000556399 CCDC192P0DO97 292 aa18.02■□□□□ 0.48
ARHGEF40-207ENST00000556399 IL1RAPL2Q9NP60 686 aa18.02■□□□□ 0.48
ARHGEF40-207ENST00000556399 PDCP20941 246 aa18.02■□□□□ 0.47
ARHGEF40-207ENST00000556399 ZNF692Q9BU19 519 aaPredicted RBP18.02■□□□□ 0.47
ARHGEF40-207ENST00000556399 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.47
ARHGEF40-207ENST00000556399 CCDC34Q96HJ3 373 aa18.02■□□□□ 0.47
ARHGEF40-207ENST00000556399 NUTM2GQ5VZR2 741 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 MCM10Q7L590 875 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 TPD52L1Q16890 204 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 FSD1Q9BTV5 496 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 TNNT3P45378 269 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 NLRP6P59044 892 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 SMC5Q8IY18 1101 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 CYP46A1Q9Y6A2 500 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 RAPGEF3O95398 923 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 PDCL3Q9H2J4 239 aa18.01■□□□□ 0.47
ARHGEF40-207ENST00000556399 HDGFL1Q5TGJ6 251 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 ZSCAN23Q3MJ62 389 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 TTC22Q5TAA0 569 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 HOMER1Q86YM7 354 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 ADGRL1O94910 1474 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 MX1P20591 662 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 RAB3GAP1Q15042 981 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 RBM27Q9P2N5 1060 aaKnown RBP18■□□□□ 0.47
ARHGEF40-207ENST00000556399 MBIPQ9NS73 344 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 MIS18AQ9NYP9 233 aa18■□□□□ 0.47
ARHGEF40-207ENST00000556399 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
ARHGEF40-207ENST00000556399 ZBTB40Q9NUA8 1239 aa17.98■□□□□ 0.47
ARHGEF40-207ENST00000556399 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
ARHGEF40-207ENST00000556399 ARHGAP45Q92619 1136 aa17.98■□□□□ 0.47
ARHGEF40-207ENST00000556399 WAPLQ7Z5K2 1190 aa17.98■□□□□ 0.47
ARHGEF40-207ENST00000556399 NME9Q86XW9 330 aa17.97■□□□□ 0.47
ARHGEF40-207ENST00000556399 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
ARHGEF40-207ENST00000556399 CCAR2Q8N163 923 aaKnown RBP17.97■□□□□ 0.47
ARHGEF40-207ENST00000556399 KRT85P78386 507 aa17.97■□□□□ 0.47
ARHGEF40-207ENST00000556399 CWC27Q6UX04 472 aaKnown RBP17.97■□□□□ 0.47
ARHGEF40-207ENST00000556399 CPLX1O14810 134 aa17.97■□□□□ 0.47
ARHGEF40-207ENST00000556399 LARP1BQ659C4 914 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-207ENST00000556399 NUTM1Q86Y26 1132 aa17.96■□□□□ 0.47
ARHGEF40-207ENST00000556399 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
ARHGEF40-207ENST00000556399 TNMDQ9H2S6 317 aa17.96■□□□□ 0.47
ARHGEF40-207ENST00000556399 KDM5BQ9UGL1 1544 aa17.96■□□□□ 0.47
ARHGEF40-207ENST00000556399 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
ARHGEF40-207ENST00000556399 ADGBQ8N7X0 1667 aa17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 PLCH2O75038 1416 aa17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 HIP1O00291 1037 aa17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 F6X3S4 739 aa17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 RIC3Q7Z5B4 369 aa17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 CREBRFQ8IUR6 639 aa17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 NUDT16Q96DE0 195 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 JAKMIP1Q96N16 626 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 PDRG1Q9NUG6 133 aa17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 SDF4Q9BRK5 362 aa17.95■□□□□ 0.46
ARHGEF40-207ENST00000556399 FYB1O15117 783 aa17.94■□□□□ 0.46
ARHGEF40-207ENST00000556399 CCDC61Q9Y6R9 512 aa17.94■□□□□ 0.46
ARHGEF40-207ENST00000556399 GDPD2Q9HCC8 539 aa17.94■□□□□ 0.46
ARHGEF40-207ENST00000556399 FAM83GA6ND36 823 aa17.94■□□□□ 0.46
ARHGEF40-207ENST00000556399 FBLN1P23142 703 aa17.94■□□□□ 0.46
ARHGEF40-207ENST00000556399 ERC1Q8IUD2 1116 aa17.94■□□□□ 0.46
ARHGEF40-207ENST00000556399 NAT10Q9H0A0 1025 aaKnown RBP17.94■□□□□ 0.46
ARHGEF40-207ENST00000556399 SDSP20132 328 aa17.94■□□□□ 0.46
ARHGEF40-207ENST00000556399 CCDC183Q5T5S1 534 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms