RNA–Protein interactions for RNA: ENST00000555944.5

NSFL1C-213, Transcript of NSFL1 cofactor, humanhuman

TSL 2

Gene NSFL1C, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-213ENST00000555944 ACEP12821 1306 aa22.76■■□□□ 1.23
NSFL1C-213ENST00000555944 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.75■■□□□ 1.23
NSFL1C-213ENST00000555944 IL13P35225 146 aa22.74■■□□□ 1.23
NSFL1C-213ENST00000555944 THEMISQ8N1K5 641 aaPredicted RBP22.74■■□□□ 1.23
NSFL1C-213ENST00000555944 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
NSFL1C-213ENST00000555944 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
NSFL1C-213ENST00000555944 PNNQ9H307 717 aaKnown RBP22.73■■□□□ 1.23
NSFL1C-213ENST00000555944 PMFBP1Q8TBY8 1022 aa22.73■■□□□ 1.23
NSFL1C-213ENST00000555944 PHACTR3Q96KR7 559 aa22.73■■□□□ 1.23
NSFL1C-213ENST00000555944 TTC21BQ7Z4L5 1316 aa22.72■■□□□ 1.23
NSFL1C-213ENST00000555944 PTCH1Q13635 1447 aa22.71■■□□□ 1.23
NSFL1C-213ENST00000555944 PLEKHG3A1L390 1219 aa22.71■■□□□ 1.23
NSFL1C-213ENST00000555944 USP6P35125 1406 aa22.71■■□□□ 1.23
NSFL1C-213ENST00000555944 RGPD8O14715 1765 aaPredicted RBP22.7■■□□□ 1.22
NSFL1C-213ENST00000555944 RIMS1Q86UR5 1692 aaKnown RBP22.7■■□□□ 1.22
NSFL1C-213ENST00000555944 DIP2AQ14689 1571 aa22.7■■□□□ 1.22
NSFL1C-213ENST00000555944 IL16Q14005 1332 aa22.7■■□□□ 1.22
NSFL1C-213ENST00000555944 CEP170BQ9Y4F5 1589 aaPredicted RBP22.7■■□□□ 1.22
NSFL1C-213ENST00000555944 XRN1Q8IZH2 1706 aaKnown RBP22.69■■□□□ 1.22
NSFL1C-213ENST00000555944 VIRMAQ69YN4 1812 aaKnown RBP22.69■■□□□ 1.22
NSFL1C-213ENST00000555944 MVPQ14764 893 aaKnown RBP22.68■■□□□ 1.22
NSFL1C-213ENST00000555944 SPRYD3Q8NCJ5 442 aa22.68■■□□□ 1.22
NSFL1C-213ENST00000555944 OVOS2A0A0J9YW53 1432 aa22.68■■□□□ 1.22
NSFL1C-213ENST00000555944 OVOS2Q6IE36 1432 aa22.68■■□□□ 1.22
NSFL1C-213ENST00000555944 FTSJ3Q8IY81 847 aaKnown RBP22.67■■□□□ 1.22
NSFL1C-213ENST00000555944 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
NSFL1C-213ENST00000555944 SMC4Q9NTJ3 1288 aa22.66■■□□□ 1.22
NSFL1C-213ENST00000555944 NFE2L2Q16236 605 aa22.66■■□□□ 1.22
NSFL1C-213ENST00000555944 ZKSCAN2Q63HK3 967 aa22.66■■□□□ 1.22
NSFL1C-213ENST00000555944 DZIP1LQ8IYY4 767 aaKnown RBP22.66■■□□□ 1.22
NSFL1C-213ENST00000555944 NALCNQ8IZF0 1738 aa22.66■■□□□ 1.22
NSFL1C-213ENST00000555944 CT47B1P0C2W7 299 aaPredicted RBP22.65■■□□□ 1.22
NSFL1C-213ENST00000555944 SSH1Q8WYL5 1049 aa22.65■■□□□ 1.22
NSFL1C-213ENST00000555944 THUMPD2Q9BTF0 503 aaKnown RBP22.65■■□□□ 1.22
NSFL1C-213ENST00000555944 DLG5Q8TDM6 1919 aa22.65■■□□□ 1.22
NSFL1C-213ENST00000555944 SSH2Q76I76 1423 aa22.64■■□□□ 1.22
NSFL1C-213ENST00000555944 TRIM27P14373 513 aa22.64■■□□□ 1.21
NSFL1C-213ENST00000555944 TBC1D32Q96NH3 1257 aa22.64■■□□□ 1.21
NSFL1C-213ENST00000555944 PEAK1Q9H792 1746 aa22.64■■□□□ 1.21
NSFL1C-213ENST00000555944 TBC1D2Q9BYX2 928 aa22.63■■□□□ 1.21
NSFL1C-213ENST00000555944 KCNA6P17658 529 aa22.63■■□□□ 1.21
NSFL1C-213ENST00000555944 BECN1Q14457 450 aa22.62■■□□□ 1.21
NSFL1C-213ENST00000555944 ITPRIPQ8IWB1 547 aa22.62■■□□□ 1.21
NSFL1C-213ENST00000555944 SOX12O15370 315 aa22.6■■□□□ 1.21
NSFL1C-213ENST00000555944 ANTXR1Q9H6X2 564 aa22.6■■□□□ 1.21
NSFL1C-213ENST00000555944 NOB1Q9ULX3 412 aaKnown RBP22.6■■□□□ 1.21
NSFL1C-213ENST00000555944 EIF4A2Q14240 407 aaKnown RBP22.6■■□□□ 1.21
NSFL1C-213ENST00000555944 AEBP1Q8IUX7 1158 aa22.59■■□□□ 1.21
NSFL1C-213ENST00000555944 UPF2Q9HAU5 1272 aaKnown RBP22.59■■□□□ 1.21
NSFL1C-213ENST00000555944 USP31Q70CQ4 1352 aa22.58■■□□□ 1.21
NSFL1C-213ENST00000555944 MFAP1P55081 439 aaKnown RBP22.57■■□□□ 1.2
NSFL1C-213ENST00000555944 AAMPQ13685 434 aa22.57■■□□□ 1.2
NSFL1C-213ENST00000555944 TMEM57Q8N5G2 664 aa22.57■■□□□ 1.2
NSFL1C-213ENST00000555944 NGDNQ8NEJ9 315 aaKnown RBP22.57■■□□□ 1.2
NSFL1C-213ENST00000555944 HSP90AB2PQ58FF8 381 aa22.56■■□□□ 1.2
NSFL1C-213ENST00000555944 FAM83GA6ND36 823 aa22.55■■□□□ 1.2
NSFL1C-213ENST00000555944 PIK3C2AO00443 1686 aa22.55■■□□□ 1.2
NSFL1C-213ENST00000555944 ATF7IPQ6VMQ6 1270 aa22.55■■□□□ 1.2
NSFL1C-213ENST00000555944 ZNF142P52746 1687 aaPredicted RBP22.55■■□□□ 1.2
NSFL1C-213ENST00000555944 TTC21AQ8NDW8 1320 aa22.55■■□□□ 1.2
NSFL1C-213ENST00000555944 FMN2Q9NZ56 1722 aa22.54■■□□□ 1.2
NSFL1C-213ENST00000555944 SULT6B1Q6IMI4 303 aa22.54■■□□□ 1.2
NSFL1C-213ENST00000555944 RGPD1P0DJD0 1748 aa22.54■■□□□ 1.2
NSFL1C-213ENST00000555944 PIK3R4Q99570 1358 aa22.53■■□□□ 1.2
NSFL1C-213ENST00000555944 ARXQ96QS3 562 aa22.53■■□□□ 1.2
NSFL1C-213ENST00000555944 ADAMTSL3P82987 1691 aa22.53■■□□□ 1.2
NSFL1C-213ENST00000555944 DCTN1Q14203 1278 aa22.52■■□□□ 1.2
NSFL1C-213ENST00000555944 CHD2O14647 1828 aaKnown RBP22.52■■□□□ 1.2
NSFL1C-213ENST00000555944 MBIPQ9NS73 344 aa22.52■■□□□ 1.2
NSFL1C-213ENST00000555944 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
NSFL1C-213ENST00000555944 ZNF853P0CG23 659 aa22.51■■□□□ 1.19
NSFL1C-213ENST00000555944 TSPYL6Q8N831 410 aa22.51■■□□□ 1.19
NSFL1C-213ENST00000555944 IFT57Q9NWB7 429 aa22.51■■□□□ 1.19
NSFL1C-213ENST00000555944 ANKARQ7Z5J8 1434 aa22.51■■□□□ 1.19
NSFL1C-213ENST00000555944 GNAI1P63096 354 aa22.5■■□□□ 1.19
NSFL1C-213ENST00000555944 CALD1Q05682 793 aaKnown RBP22.5■■□□□ 1.19
NSFL1C-213ENST00000555944 C22orf23Q9BZE7 217 aa22.5■■□□□ 1.19
NSFL1C-213ENST00000555944 ANKLE2Q86XL3 938 aa22.5■■□□□ 1.19
NSFL1C-213ENST00000555944 RBM33Q96EV2 1170 aaKnown RBP22.5■■□□□ 1.19
NSFL1C-213ENST00000555944 DDX19BQ9UMR2 479 aa22.5■■□□□ 1.19
NSFL1C-213ENST00000555944 ALDH1L2Q3SY69 923 aa22.49■■□□□ 1.19
NSFL1C-213ENST00000555944 KIF16BQ96L93 1317 aa22.49■■□□□ 1.19
NSFL1C-213ENST00000555944 VAMP4O75379 141 aa22.48■■□□□ 1.19
NSFL1C-213ENST00000555944 LMOD3Q0VAK6 560 aa22.48■■□□□ 1.19
NSFL1C-213ENST00000555944 HDAC1Q13547 482 aaPredicted RBP22.48■■□□□ 1.19
NSFL1C-213ENST00000555944 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
NSFL1C-213ENST00000555944 ELL2O00472 640 aaPredicted RBP22.48■■□□□ 1.19
NSFL1C-213ENST00000555944 ZBTB40Q9NUA8 1239 aa22.48■■□□□ 1.19
NSFL1C-213ENST00000555944 CFAP44Q96MT7 982 aa22.47■■□□□ 1.19
NSFL1C-213ENST00000555944 LNPKQ9C0E8 428 aa22.47■■□□□ 1.19
NSFL1C-213ENST00000555944 NUTM2GQ5VZR2 741 aa22.46■■□□□ 1.19
NSFL1C-213ENST00000555944 SMC5Q8IY18 1101 aa22.45■■□□□ 1.19
NSFL1C-213ENST00000555944 SBNO1A3KN83 1393 aa22.45■■□□□ 1.18
NSFL1C-213ENST00000555944 FLT4P35916 1363 aa22.45■■□□□ 1.18
NSFL1C-213ENST00000555944 C1orf115Q9H7X2 142 aa22.45■■□□□ 1.18
NSFL1C-213ENST00000555944 NLRP6P59044 892 aa22.45■■□□□ 1.18
NSFL1C-213ENST00000555944 GZF1Q9H116 711 aaPredicted RBP22.45■■□□□ 1.18
NSFL1C-213ENST00000555944 C8orf58Q8NAV2 365 aa22.44■■□□□ 1.18
NSFL1C-213ENST00000555944 IPO8O15397 1037 aaKnown RBP22.44■■□□□ 1.18
NSFL1C-213ENST00000555944 SETD1BQ9UPS6 1966 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms