RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 DLG5Q8TDM6 1919 aa31.18■■■□□ 2.58
TMEM260-207ENST00000555497 NALCNQ8IZF0 1738 aa31.18■■■□□ 2.58
TMEM260-207ENST00000555497 RIMS1Q86UR5 1692 aaKnown RBP31.17■■■□□ 2.58
TMEM260-207ENST00000555497 MVPQ14764 893 aaKnown RBP31.17■■■□□ 2.58
TMEM260-207ENST00000555497 NOP58Q9Y2X3 529 aaKnown RBP31.17■■■□□ 2.58
TMEM260-207ENST00000555497 KCNA6P17658 529 aa31.16■■■□□ 2.58
TMEM260-207ENST00000555497 EIF4A2Q14240 407 aaKnown RBP31.16■■■□□ 2.58
TMEM260-207ENST00000555497 DZIP1LQ8IYY4 767 aaKnown RBP31.16■■■□□ 2.58
TMEM260-207ENST00000555497 LAS1LQ9Y4W2 734 aaKnown RBP31.16■■■□□ 2.58
TMEM260-207ENST00000555497 PEAK1Q9H792 1746 aa31.16■■■□□ 2.58
TMEM260-207ENST00000555497 AAMPQ13685 434 aa31.16■■■□□ 2.58
TMEM260-207ENST00000555497 TRIM27P14373 513 aa31.15■■■□□ 2.58
TMEM260-207ENST00000555497 USP31Q70CQ4 1352 aa31.14■■■□□ 2.58
TMEM260-207ENST00000555497 NOB1Q9ULX3 412 aaKnown RBP31.13■■■□□ 2.57
TMEM260-207ENST00000555497 AEBP1Q8IUX7 1158 aa31.12■■■□□ 2.57
TMEM260-207ENST00000555497 FTSJ3Q8IY81 847 aaKnown RBP31.12■■■□□ 2.57
TMEM260-207ENST00000555497 C8orf34Q49A92 452 aa31.11■■■□□ 2.57
TMEM260-207ENST00000555497 HSP90AB2PQ58FF8 381 aa31.1■■■□□ 2.57
TMEM260-207ENST00000555497 ATF7IPQ6VMQ6 1270 aa31.1■■■□□ 2.57
TMEM260-207ENST00000555497 SOX12O15370 315 aa31.1■■■□□ 2.57
TMEM260-207ENST00000555497 ZNF853P0CG23 659 aa31.09■■■□□ 2.57
TMEM260-207ENST00000555497 NGDNQ8NEJ9 315 aaKnown RBP31.09■■■□□ 2.57
TMEM260-207ENST00000555497 TTC21AQ8NDW8 1320 aa31.09■■■□□ 2.57
TMEM260-207ENST00000555497 FAM83GA6ND36 823 aa31.08■■■□□ 2.57
TMEM260-207ENST00000555497 FAM161AQ3B820 660 aa31.08■■■□□ 2.57
TMEM260-207ENST00000555497 SULT6B1Q6IMI4 303 aa31.08■■■□□ 2.57
TMEM260-207ENST00000555497 IFT57Q9NWB7 429 aa31.07■■■□□ 2.56
TMEM260-207ENST00000555497 CALD1Q05682 793 aaKnown RBP31.06■■■□□ 2.56
TMEM260-207ENST00000555497 ALDH1L2Q3SY69 923 aa31.06■■■□□ 2.56
TMEM260-207ENST00000555497 TSPYL6Q8N831 410 aa31.06■■■□□ 2.56
TMEM260-207ENST00000555497 MBIPQ9NS73 344 aa31.06■■■□□ 2.56
TMEM260-207ENST00000555497 PIK3R4Q99570 1358 aa31.06■■■□□ 2.56
TMEM260-207ENST00000555497 GNAI1P63096 354 aa31.05■■■□□ 2.56
TMEM260-207ENST00000555497 VAMP4O75379 141 aa31.05■■■□□ 2.56
TMEM260-207ENST00000555497 DCTN1Q14203 1278 aa31.05■■■□□ 2.56
TMEM260-207ENST00000555497 RGPD1P0DJD0 1748 aa31.04■■■□□ 2.56
TMEM260-207ENST00000555497 MAP3K19Q56UN5 1328 aa31.03■■■□□ 2.56
TMEM260-207ENST00000555497 ZBTB47Q9UFB7 747 aaPredicted RBP31.03■■■□□ 2.56
TMEM260-207ENST00000555497 PIK3C2AO00443 1686 aa31.03■■■□□ 2.56
TMEM260-207ENST00000555497 LMOD3Q0VAK6 560 aa31.02■■■□□ 2.56
TMEM260-207ENST00000555497 KIF16BQ96L93 1317 aa31.02■■■□□ 2.56
TMEM260-207ENST00000555497 FMN2Q9NZ56 1722 aa31.02■■■□□ 2.56
TMEM260-207ENST00000555497 TMEM57Q8N5G2 664 aa31.02■■■□□ 2.56
TMEM260-207ENST00000555497 ANKARQ7Z5J8 1434 aa31.01■■■□□ 2.56
TMEM260-207ENST00000555497 ITPRIPQ8IWB1 547 aa31.01■■■□□ 2.56
TMEM260-207ENST00000555497 CFAP44Q96MT7 982 aa31■■■□□ 2.55
TMEM260-207ENST00000555497 ANKLE2Q86XL3 938 aa31■■■□□ 2.55
TMEM260-207ENST00000555497 RWDD1Q9H446 243 aaPredicted RBP31■■■□□ 2.55
TMEM260-207ENST00000555497 CHD2O14647 1828 aaKnown RBP30.99■■■□□ 2.55
TMEM260-207ENST00000555497 ZNF428Q96B54 188 aa30.99■■■□□ 2.55
TMEM260-207ENST00000555497 ELL2O00472 640 aaPredicted RBP30.98■■■□□ 2.55
TMEM260-207ENST00000555497 IPO8O15397 1037 aaKnown RBP30.98■■■□□ 2.55
TMEM260-207ENST00000555497 BRPF1P55201 1214 aaPredicted RBP30.98■■■□□ 2.55
TMEM260-207ENST00000555497 DDX19BQ9UMR2 479 aa30.98■■■□□ 2.55
TMEM260-207ENST00000555497 ZNF142P52746 1687 aaPredicted RBP30.98■■■□□ 2.55
TMEM260-207ENST00000555497 ADAMTSL3P82987 1691 aa30.98■■■□□ 2.55
TMEM260-207ENST00000555497 BCL11AQ9H165 835 aa30.98■■■□□ 2.55
TMEM260-207ENST00000555497 MRPL50Q8N5N7 158 aaKnown RBP30.97■■■□□ 2.55
TMEM260-207ENST00000555497 PDZRN3Q9UPQ7 1066 aa30.97■■■□□ 2.55
TMEM260-207ENST00000555497 C8orf58Q8NAV2 365 aa30.96■■■□□ 2.55
TMEM260-207ENST00000555497 RBM33Q96EV2 1170 aaKnown RBP30.95■■■□□ 2.55
TMEM260-207ENST00000555497 SBNO1A3KN83 1393 aa30.94■■■□□ 2.54
TMEM260-207ENST00000555497 MARF1Q9Y4F3 1742 aaKnown RBP30.94■■■□□ 2.54
TMEM260-207ENST00000555497 NLRP6P59044 892 aa30.93■■■□□ 2.54
TMEM260-207ENST00000555497 TWISTNBQ3B726 338 aaPredicted RBP30.93■■■□□ 2.54
TMEM260-207ENST00000555497 ZBTB40Q9NUA8 1239 aa30.93■■■□□ 2.54
TMEM260-207ENST00000555497 FLT4P35916 1363 aa30.93■■■□□ 2.54
TMEM260-207ENST00000555497 NUTM2GQ5VZR2 741 aa30.92■■■□□ 2.54
TMEM260-207ENST00000555497 VIRMAQ69YN4 1812 aaKnown RBP30.91■■■□□ 2.54
TMEM260-207ENST00000555497 ARHGEF10O15013 1369 aa30.9■■■□□ 2.54
TMEM260-207ENST00000555497 MCM10Q7L590 875 aa30.9■■■□□ 2.54
TMEM260-207ENST00000555497 SETD1BQ9UPS6 1966 aaKnown RBP30.9■■■□□ 2.54
TMEM260-207ENST00000555497 AMPHP49418 695 aa30.89■■■□□ 2.53
TMEM260-207ENST00000555497 HDAC1Q13547 482 aaPredicted RBP30.88■■■□□ 2.53
TMEM260-207ENST00000555497 ARHGAP45Q92619 1136 aa30.86■■■□□ 2.53
TMEM260-207ENST00000555497 EYA1Q99502 592 aa30.86■■■□□ 2.53
TMEM260-207ENST00000555497 FOXO3O43524 673 aa30.85■■■□□ 2.53
TMEM260-207ENST00000555497 CHL1O00533 1208 aa30.84■■■□□ 2.53
TMEM260-207ENST00000555497 ABTB2Q8N961 1025 aa30.84■■■□□ 2.53
TMEM260-207ENST00000555497 KRT24Q2M2I5 525 aa30.83■■■□□ 2.53
TMEM260-207ENST00000555497 PHF8Q9UPP1 1060 aa30.83■■■□□ 2.53
TMEM260-207ENST00000555497 KDRP35968 1356 aa30.83■■■□□ 2.53
TMEM260-207ENST00000555497 USP54Q70EL1 1684 aa30.83■■■□□ 2.53
TMEM260-207ENST00000555497 IGSF1Q8N6C5 1336 aa30.83■■■□□ 2.53
TMEM260-207ENST00000555497 MTHFSDQ2M296 383 aaKnown RBP30.83■■■□□ 2.53
TMEM260-207ENST00000555497 SEC24BO95487 1268 aa30.81■■■□□ 2.52
TMEM260-207ENST00000555497 CRB1P82279 1406 aa30.81■■■□□ 2.52
TMEM260-207ENST00000555497 HOXC9P31274 260 aa30.81■■■□□ 2.52
TMEM260-207ENST00000555497 ZBTB7BO15156 539 aaPredicted RBP30.8■■■□□ 2.52
TMEM260-207ENST00000555497 DDRGK1Q96HY6 314 aa30.79■■■□□ 2.52
TMEM260-207ENST00000555497 ABCC4O15439 1325 aa30.79■■■□□ 2.52
TMEM260-207ENST00000555497 SMC5Q8IY18 1101 aa30.78■■■□□ 2.52
TMEM260-207ENST00000555497 USP19O94966 1318 aa30.78■■■□□ 2.52
TMEM260-207ENST00000555497 NPHP4O75161 1426 aaPredicted RBP30.77■■■□□ 2.52
TMEM260-207ENST00000555497 ADGRL3Q9HAR2 1447 aa30.77■■■□□ 2.52
TMEM260-207ENST00000555497 NWD1Q149M9 1564 aa30.75■■■□□ 2.51
TMEM260-207ENST00000555497 C14orf37Q86TY3 774 aa30.75■■■□□ 2.51
TMEM260-207ENST00000555497 MIS18AQ9NYP9 233 aa30.74■■■□□ 2.51
TMEM260-207ENST00000555497 KIF24Q5T7B8 1368 aa30.74■■■□□ 2.51
TMEM260-207ENST00000555497 KIAA0232Q92628 1395 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms