RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 FOSBP53539 338 aa12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 GDPD2Q9HCC8 539 aa12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 MCM10Q7L590 875 aa12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 ZMYND15Q9H091 742 aa12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 HMGN5P82970 282 aaKnown RBP12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 NUTM2GQ5VZR2 741 aa12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 C14orf93Q9H972 538 aaKnown RBP12.32□□□□□ -0.44
SMARCC2-209ENST00000550164 SNX21Q969T3 373 aa12.31□□□□□ -0.44
SMARCC2-209ENST00000550164 ZNF330Q9Y3S2 320 aaPredicted RBP12.31□□□□□ -0.44
SMARCC2-209ENST00000550164 DISP1Q96F81 1524 aa12.31□□□□□ -0.44
SMARCC2-209ENST00000550164 SASS6Q6UVJ0 657 aa12.31□□□□□ -0.44
SMARCC2-209ENST00000550164 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
SMARCC2-209ENST00000550164 KDM5BQ9UGL1 1544 aa12.31□□□□□ -0.44
SMARCC2-209ENST00000550164 TPM4P67936 248 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 RAB3GAP1Q15042 981 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 TRIM5Q9C035 493 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 ADAMTS12P58397 1594 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 ZSCAN23Q3MJ62 389 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 CCDC30Q5VVM6 783 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 WAPLQ7Z5K2 1190 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 PDCL3Q9H2J4 239 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 INSRP06213 1382 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 F6X3S4 739 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 GORABQ5T7V8 394 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 SHANK2Q9UPX8 1470 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 KIF3AQ9Y496 699 aa12.3□□□□□ -0.44
SMARCC2-209ENST00000550164 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
SMARCC2-209ENST00000550164 CLASRPQ8N2M8 674 aaKnown RBP12.29□□□□□ -0.44
SMARCC2-209ENST00000550164 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
SMARCC2-209ENST00000550164 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
SMARCC2-209ENST00000550164 RNF20Q5VTR2 975 aa12.29□□□□□ -0.44
SMARCC2-209ENST00000550164 NME9Q86XW9 330 aa12.29□□□□□ -0.44
SMARCC2-209ENST00000550164 C16orf71Q8IYS4 520 aaPredicted RBP12.29□□□□□ -0.44
SMARCC2-209ENST00000550164 EID1Q9Y6B2 187 aa12.29□□□□□ -0.44
SMARCC2-209ENST00000550164 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 G3BP1Q13283 466 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 HSP90AB4PQ58FF6 505 aa12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 IL16Q14005 1332 aa12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 ZNF521Q96K83 1311 aa12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 FYB1O15117 783 aa12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 EIF2AK4Q9P2K8 1649 aaKnown RBP12.28□□□□□ -0.44
SMARCC2-209ENST00000550164 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.44
SMARCC2-209ENST00000550164 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.44
SMARCC2-209ENST00000550164 USP25Q9UHP3 1055 aa12.27□□□□□ -0.44
SMARCC2-209ENST00000550164 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.44
SMARCC2-209ENST00000550164 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
SMARCC2-209ENST00000550164 RTEL1-TNFRSF6BF6WH68 1400 aa12.27□□□□□ -0.45
SMARCC2-209ENST00000550164 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.45
SMARCC2-209ENST00000550164 SDSP20132 328 aa12.27□□□□□ -0.45
SMARCC2-209ENST00000550164 IDI1Q13907 227 aa12.27□□□□□ -0.45
SMARCC2-209ENST00000550164 NUTM1Q86Y26 1132 aa12.27□□□□□ -0.45
SMARCC2-209ENST00000550164 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 MX1P20591 662 aa12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 NLRP6P59044 892 aa12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 CWC27Q6UX04 472 aaKnown RBP12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 TRMT2AQ8IZ69 625 aaKnown RBP12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 NPC1L1Q9UHC9 1359 aa12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 AIMP1Q12904 312 aaKnown RBP12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 DUOX2Q9NRD8 1548 aa12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 NSD2O96028 1365 aa12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 CCDC192P0DO97 292 aa12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 TPD52L1Q16890 204 aaPredicted RBP12.26□□□□□ -0.45
SMARCC2-209ENST00000550164 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 ZGPATQ8N5A5 531 aaKnown RBP12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 RBM25P49756 843 aaKnown RBP12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 FSD1Q9BTV5 496 aa12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 FERMT3Q86UX7 667 aa12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 C8orf58Q8NAV2 365 aa12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
SMARCC2-209ENST00000550164 NEXNQ0ZGT2 675 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 STK3Q13188 491 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 CCDC73Q6ZRK6 1079 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 HOMER1Q86YM7 354 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 CYP46A1Q9Y6A2 500 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 TPM3P06753 285 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 LARP1BQ659C4 914 aaKnown RBP12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 CCAR2Q8N163 923 aaKnown RBP12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 MEIS3Q99687 375 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 ANKRD36BQ8N2N9 1353 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 TMX3Q96JJ7 454 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 SRCIN1Q9C0H9 1055 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 MBD5Q9P267 1494 aa12.24□□□□□ -0.45
SMARCC2-209ENST00000550164 NPHP1O15259 732 aa12.23□□□□□ -0.45
SMARCC2-209ENST00000550164 VAMP4O75379 141 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms