RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 ZNF428Q96B54 188 aa23.94■■□□□ 1.42
VDR-204ENST00000547065 ZNF142P52746 1687 aaPredicted RBP23.94■■□□□ 1.42
VDR-204ENST00000547065 GNAI1P63096 354 aa23.93■■□□□ 1.42
VDR-204ENST00000547065 ALDH1L2Q3SY69 923 aa23.93■■□□□ 1.42
VDR-204ENST00000547065 DZIP1LQ8IYY4 767 aaKnown RBP23.93■■□□□ 1.42
VDR-204ENST00000547065 IFT57Q9NWB7 429 aa23.93■■□□□ 1.42
VDR-204ENST00000547065 NALCNQ8IZF0 1738 aa23.92■■□□□ 1.42
VDR-204ENST00000547065 TNNQ9UQP3 1299 aa23.91■■□□□ 1.42
VDR-204ENST00000547065 IGHDP01880 384 aa23.91■■□□□ 1.42
VDR-204ENST00000547065 ZNF853P0CG23 659 aa23.91■■□□□ 1.42
VDR-204ENST00000547065 MVPQ14764 893 aaKnown RBP23.9■■□□□ 1.42
VDR-204ENST00000547065 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
VDR-204ENST00000547065 SULT6B1Q6IMI4 303 aa23.9■■□□□ 1.42
VDR-204ENST00000547065 FTSJ3Q8IY81 847 aaKnown RBP23.9■■□□□ 1.42
VDR-204ENST00000547065 LAS1LQ9Y4W2 734 aaKnown RBP23.9■■□□□ 1.42
VDR-204ENST00000547065 SETD1BQ9UPS6 1966 aaKnown RBP23.9■■□□□ 1.42
VDR-204ENST00000547065 IPO8O15397 1037 aaKnown RBP23.89■■□□□ 1.42
VDR-204ENST00000547065 ANP32AP39687 249 aaKnown RBP23.89■■□□□ 1.42
VDR-204ENST00000547065 SKAP1Q86WV1 359 aa23.89■■□□□ 1.42
VDR-204ENST00000547065 ATF7IPQ6VMQ6 1270 aa23.88■■□□□ 1.41
VDR-204ENST00000547065 MAP3K19Q56UN5 1328 aa23.87■■□□□ 1.41
VDR-204ENST00000547065 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
VDR-204ENST00000547065 BRPF1P55201 1214 aaPredicted RBP23.87■■□□□ 1.41
VDR-204ENST00000547065 THUMPD2Q9BTF0 503 aaKnown RBP23.87■■□□□ 1.41
VDR-204ENST00000547065 NOB1Q9ULX3 412 aaKnown RBP23.87■■□□□ 1.41
VDR-204ENST00000547065 KIF16BQ96L93 1317 aa23.87■■□□□ 1.41
VDR-204ENST00000547065 CHD2O14647 1828 aaKnown RBP23.87■■□□□ 1.41
VDR-204ENST00000547065 SBNO1A3KN83 1393 aa23.87■■□□□ 1.41
VDR-204ENST00000547065 CFAP44Q96MT7 982 aa23.86■■□□□ 1.41
VDR-204ENST00000547065 ANP32EQ9BTT0 268 aa23.86■■□□□ 1.41
VDR-204ENST00000547065 RGPD8O14715 1765 aaPredicted RBP23.86■■□□□ 1.41
VDR-204ENST00000547065 NLRP6P59044 892 aa23.86■■□□□ 1.41
VDR-204ENST00000547065 AEBP1Q8IUX7 1158 aa23.86■■□□□ 1.41
VDR-204ENST00000547065 SOX12O15370 315 aa23.85■■□□□ 1.41
VDR-204ENST00000547065 TRIM27P14373 513 aa23.85■■□□□ 1.41
VDR-204ENST00000547065 FLT4P35916 1363 aa23.85■■□□□ 1.41
VDR-204ENST00000547065 PEAK1Q9H792 1746 aa23.84■■□□□ 1.41
VDR-204ENST00000547065 VAMP4O75379 141 aa23.83■■□□□ 1.41
VDR-204ENST00000547065 MBIPQ9NS73 344 aa23.83■■□□□ 1.41
VDR-204ENST00000547065 PHF8Q9UPP1 1060 aa23.83■■□□□ 1.41
VDR-204ENST00000547065 PCDHB15Q9Y5E8 787 aa23.83■■□□□ 1.41
VDR-204ENST00000547065 ARHGEF10O15013 1369 aa23.83■■□□□ 1.41
VDR-204ENST00000547065 AMPHP49418 695 aa23.83■■□□□ 1.4
VDR-204ENST00000547065 RWDD1Q9H446 243 aaPredicted RBP23.83■■□□□ 1.4
VDR-204ENST00000547065 NPHP4O75161 1426 aaPredicted RBP23.82■■□□□ 1.4
VDR-204ENST00000547065 DDX19BQ9UMR2 479 aa23.82■■□□□ 1.4
VDR-204ENST00000547065 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
VDR-204ENST00000547065 IPO9Q96P70 1041 aaKnown RBP23.8■■□□□ 1.4
VDR-204ENST00000547065 PIK3C2AO00443 1686 aa23.8■■□□□ 1.4
VDR-204ENST00000547065 FAM83GA6ND36 823 aa23.79■■□□□ 1.4
VDR-204ENST00000547065 RGS3P49796 1198 aa23.79■■□□□ 1.4
VDR-204ENST00000547065 FAM161AQ3B820 660 aa23.79■■□□□ 1.4
VDR-204ENST00000547065 ERICH6Q7L0X2 663 aa23.79■■□□□ 1.4
VDR-204ENST00000547065 ABTB2Q8N961 1025 aa23.79■■□□□ 1.4
VDR-204ENST00000547065 RGPD1P0DJD0 1748 aa23.79■■□□□ 1.4
VDR-204ENST00000547065 ARHGAP45Q92619 1136 aa23.78■■□□□ 1.4
VDR-204ENST00000547065 ADGRL3Q9HAR2 1447 aa23.78■■□□□ 1.4
VDR-204ENST00000547065 MRPL50Q8N5N7 158 aaKnown RBP23.78■■□□□ 1.4
VDR-204ENST00000547065 PAK3O75914 559 aaPredicted RBP23.77■■□□□ 1.4
VDR-204ENST00000547065 ITPRIPQ8IWB1 547 aa23.77■■□□□ 1.4
VDR-204ENST00000547065 DCTN1Q14203 1278 aa23.76■■□□□ 1.39
VDR-204ENST00000547065 TWISTNBQ3B726 338 aaPredicted RBP23.76■■□□□ 1.39
VDR-204ENST00000547065 TSPYL6Q8N831 410 aa23.76■■□□□ 1.39
VDR-204ENST00000547065 DLG5Q8TDM6 1919 aa23.76■■□□□ 1.39
VDR-204ENST00000547065 TMEM57Q8N5G2 664 aa23.75■■□□□ 1.39
VDR-204ENST00000547065 KDRP35968 1356 aa23.75■■□□□ 1.39
VDR-204ENST00000547065 IGSF1Q8N6C5 1336 aa23.74■■□□□ 1.39
VDR-204ENST00000547065 EYA1Q99502 592 aa23.74■■□□□ 1.39
VDR-204ENST00000547065 USP54Q70EL1 1684 aa23.74■■□□□ 1.39
VDR-204ENST00000547065 CHL1O00533 1208 aa23.73■■□□□ 1.39
VDR-204ENST00000547065 NUTM2GQ5VZR2 741 aa23.73■■□□□ 1.39
VDR-204ENST00000547065 C8orf58Q8NAV2 365 aa23.73■■□□□ 1.39
VDR-204ENST00000547065 RBM33Q96EV2 1170 aaKnown RBP23.73■■□□□ 1.39
VDR-204ENST00000547065 HOXC9P31274 260 aa23.73■■□□□ 1.39
VDR-204ENST00000547065 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
VDR-204ENST00000547065 NOP58Q9Y2X3 529 aaKnown RBP23.73■■□□□ 1.39
VDR-204ENST00000547065 PSME1Q06323 249 aa23.72■■□□□ 1.39
VDR-204ENST00000547065 HDAC1Q13547 482 aaPredicted RBP23.72■■□□□ 1.39
VDR-204ENST00000547065 ESCO1Q5FWF5 840 aa23.72■■□□□ 1.39
VDR-204ENST00000547065 NPM2Q86SE8 214 aaKnown RBP23.72■■□□□ 1.39
VDR-204ENST00000547065 CHMP4BQ9H444 224 aaKnown RBP23.72■■□□□ 1.39
VDR-204ENST00000547065 C8orf34Q49A92 452 aa23.71■■□□□ 1.39
VDR-204ENST00000547065 ZBTB40Q9NUA8 1239 aa23.71■■□□□ 1.39
VDR-204ENST00000547065 ELL2O00472 640 aaPredicted RBP23.7■■□□□ 1.39
VDR-204ENST00000547065 C14orf37Q86TY3 774 aa23.7■■□□□ 1.39
VDR-204ENST00000547065 MTHFSDQ2M296 383 aaKnown RBP23.7■■□□□ 1.38
VDR-204ENST00000547065 MCM10Q7L590 875 aa23.7■■□□□ 1.38
VDR-204ENST00000547065 GAS2L2Q8NHY3 880 aa23.7■■□□□ 1.38
VDR-204ENST00000547065 MYT1Q01538 1121 aa23.69■■□□□ 1.38
VDR-204ENST00000547065 ZBTB47Q9UFB7 747 aaPredicted RBP23.69■■□□□ 1.38
VDR-204ENST00000547065 RTF1Q92541 710 aaKnown RBP23.68■■□□□ 1.38
VDR-204ENST00000547065 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
VDR-204ENST00000547065 RTL1A6NKG5 1358 aa23.68■■□□□ 1.38
VDR-204ENST00000547065 HTATSF1O43719 755 aaKnown RBP23.68■■□□□ 1.38
VDR-204ENST00000547065 KIAA0232Q92628 1395 aa23.67■■□□□ 1.38
VDR-204ENST00000547065 CRB1P82279 1406 aa23.66■■□□□ 1.38
VDR-204ENST00000547065 MARF1Q9Y4F3 1742 aaKnown RBP23.66■■□□□ 1.38
VDR-204ENST00000547065 API5Q9BZZ5 524 aaKnown RBP23.66■■□□□ 1.38
VDR-204ENST00000547065 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
VDR-204ENST00000547065 KCNH5Q8NCM2 988 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms