RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 HIP1O00291 1037 aa15.33■□□□□ 0.04
CHD4-211ENST00000544484 NASPP49321 788 aaPredicted RBP15.33■□□□□ 0.04
CHD4-211ENST00000544484 CHD1LQ86WJ1 897 aa15.33■□□□□ 0.04
CHD4-211ENST00000544484 FMNL2Q96PY5 1086 aa15.33■□□□□ 0.04
CHD4-211ENST00000544484 FAM13BQ9NYF5 915 aa15.33■□□□□ 0.04
CHD4-211ENST00000544484 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.04
CHD4-211ENST00000544484 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
CHD4-211ENST00000544484 NFE2L2Q16236 605 aa15.32■□□□□ 0.04
CHD4-211ENST00000544484 PLB1Q6P1J6 1458 aa15.32■□□□□ 0.04
CHD4-211ENST00000544484 AACSQ86V21 672 aa15.32■□□□□ 0.04
CHD4-211ENST00000544484 TMEM57Q8N5G2 664 aa15.32■□□□□ 0.04
CHD4-211ENST00000544484 BACH2Q9BYV9 841 aa15.32■□□□□ 0.04
CHD4-211ENST00000544484 PDILTQ8N807 584 aa15.32■□□□□ 0.04
CHD4-211ENST00000544484 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
CHD4-211ENST00000544484 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHD4-211ENST00000544484 NAP1L1P55209 391 aaKnown RBP15.31■□□□□ 0.04
CHD4-211ENST00000544484 CT47B1P0C2W7 299 aaPredicted RBP15.31■□□□□ 0.04
CHD4-211ENST00000544484 SLFN5Q08AF3 891 aa15.31■□□□□ 0.04
CHD4-211ENST00000544484 OLFM4Q6UX06 510 aa15.31■□□□□ 0.04
CHD4-211ENST00000544484 CCDC57Q2TAC2 916 aa15.31■□□□□ 0.04
CHD4-211ENST00000544484 FAM43AQ8N2R8 423 aa15.3■□□□□ 0.04
CHD4-211ENST00000544484 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
CHD4-211ENST00000544484 PPP1R1BQ9UD71 204 aaPredicted RBP15.3■□□□□ 0.04
CHD4-211ENST00000544484 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
CHD4-211ENST00000544484 MCM2P49736 904 aa15.3■□□□□ 0.04
CHD4-211ENST00000544484 USHBP1Q8N6Y0 703 aa15.3■□□□□ 0.04
CHD4-211ENST00000544484 NME9Q86XW9 330 aa15.3■□□□□ 0.04
CHD4-211ENST00000544484 MPHOSPH8Q99549 860 aa15.3■□□□□ 0.04
CHD4-211ENST00000544484 EXOC6BQ9Y2D4 811 aa15.3■□□□□ 0.04
CHD4-211ENST00000544484 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
CHD4-211ENST00000544484 KINO60870 393 aaKnown RBP15.29■□□□□ 0.04
CHD4-211ENST00000544484 PDCP20941 246 aa15.29■□□□□ 0.04
CHD4-211ENST00000544484 FBXO31Q5XUX0 539 aaPredicted RBP15.29■□□□□ 0.04
CHD4-211ENST00000544484 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
CHD4-211ENST00000544484 CCDC141Q6ZP82 1450 aa15.29■□□□□ 0.04
CHD4-211ENST00000544484 MRE11P49959 708 aa15.29■□□□□ 0.04
CHD4-211ENST00000544484 ATP2B2Q01814 1243 aa15.29■□□□□ 0.04
CHD4-211ENST00000544484 CWC27Q6UX04 472 aaKnown RBP15.29■□□□□ 0.04
CHD4-211ENST00000544484 PCF11O94913 1555 aaKnown RBP15.29■□□□□ 0.04
CHD4-211ENST00000544484 SKAP1Q86WV1 359 aa15.28■□□□□ 0.04
CHD4-211ENST00000544484 TRIM5Q9C035 493 aa15.28■□□□□ 0.04
CHD4-211ENST00000544484 GNAT3A8MTJ3 354 aa15.28■□□□□ 0.04
CHD4-211ENST00000544484 NAT10Q9H0A0 1025 aaKnown RBP15.28■□□□□ 0.04
CHD4-211ENST00000544484 PTCD1O75127 700 aaKnown RBP15.28■□□□□ 0.04
CHD4-211ENST00000544484 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.046e-7■■□□□ 14.3
CHD4-211ENST00000544484 ADGRF5Q8IZF2 1346 aa15.28■□□□□ 0.04
CHD4-211ENST00000544484 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
CHD4-211ENST00000544484 STK38Q15208 465 aa15.27■□□□□ 0.04
CHD4-211ENST00000544484 DUSP27Q5VZP5 1158 aa15.27■□□□□ 0.04
CHD4-211ENST00000544484 IQGAP2Q13576 1575 aa15.27■□□□□ 0.04
CHD4-211ENST00000544484 BICDL1Q6ZP65 573 aa15.27■□□□□ 0.04
CHD4-211ENST00000544484 NUTM1Q86Y26 1132 aa15.27■□□□□ 0.04
CHD4-211ENST00000544484 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
CHD4-211ENST00000544484 TTLL5Q6EMB2 1281 aa15.27■□□□□ 0.03
CHD4-211ENST00000544484 EMILIN1Q9Y6C2 1016 aa15.27■□□□□ 0.03
CHD4-211ENST00000544484 GPS2Q13227 327 aa15.27■□□□□ 0.03
CHD4-211ENST00000544484 ABCC5O15440 1437 aa15.26■□□□□ 0.03
CHD4-211ENST00000544484 MBD3O95983 291 aa15.26■□□□□ 0.03
CHD4-211ENST00000544484 C20orf194Q5TEA3 1177 aa15.26■□□□□ 0.03
CHD4-211ENST00000544484 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
CHD4-211ENST00000544484 SLC3A2P08195 630 aaKnown RBP15.26■□□□□ 0.03
CHD4-211ENST00000544484 CEBPAP49715 358 aaPredicted RBP15.26■□□□□ 0.03
CHD4-211ENST00000544484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.26■□□□□ 0.03
CHD4-211ENST00000544484 CEP126Q9P2H0 1117 aa15.26■□□□□ 0.03
CHD4-211ENST00000544484 K7ELQ4 463 aaPredicted RBP15.25■□□□□ 0.03
CHD4-211ENST00000544484 SMC2O95347 1197 aa15.25■□□□□ 0.03
CHD4-211ENST00000544484 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
CHD4-211ENST00000544484 OFD1O75665 1012 aa15.25■□□□□ 0.03
CHD4-211ENST00000544484 MPNDQ8N594 471 aa15.25■□□□□ 0.03
CHD4-211ENST00000544484 NUP133Q8WUM0 1156 aa15.25■□□□□ 0.03
CHD4-211ENST00000544484 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
CHD4-211ENST00000544484 EPS15P42566 896 aa15.25■□□□□ 0.03
CHD4-211ENST00000544484 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
CHD4-211ENST00000544484 MNS1Q8NEH6 495 aa15.25■□□□□ 0.03
CHD4-211ENST00000544484 SMARCA5O60264 1052 aaPredicted RBP15.24■□□□□ 0.03
CHD4-211ENST00000544484 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.24■□□□□ 0.03
CHD4-211ENST00000544484 POGZQ7Z3K3 1410 aa15.24■□□□□ 0.03
CHD4-211ENST00000544484 IDI1Q13907 227 aa15.24■□□□□ 0.03
CHD4-211ENST00000544484 R3HCC1Q9Y3T6 440 aaKnown RBP15.24■□□□□ 0.03
CHD4-211ENST00000544484 FOXO3O43524 673 aa15.24■□□□□ 0.03
CHD4-211ENST00000544484 TSPY26PQ9H489 355 aa15.24■□□□□ 0.03
CHD4-211ENST00000544484 JAKMIP1Q96N16 626 aaKnown RBP15.24■□□□□ 0.03
CHD4-211ENST00000544484 RPAP2Q8IXW5 612 aaPredicted RBP15.23■□□□□ 0.03
CHD4-211ENST00000544484 NACAP1Q9BZK3 213 aa15.23■□□□□ 0.03
CHD4-211ENST00000544484 BLOC1S2Q6QNY1 142 aa15.23■□□□□ 0.03
CHD4-211ENST00000544484 ZNF396Q96N95 335 aaPredicted RBP15.23■□□□□ 0.03
CHD4-211ENST00000544484 CT47A1Q5JQC4 288 aaPredicted RBP15.23■□□□□ 0.03
CHD4-211ENST00000544484 LARP1BQ659C4 914 aaKnown RBP15.23■□□□□ 0.03
CHD4-211ENST00000544484 F6X3S4 739 aa15.22■□□□□ 0.03
CHD4-211ENST00000544484 SPC24Q8NBT2 197 aa15.22■□□□□ 0.03
CHD4-211ENST00000544484 CCDC39Q9UFE4 941 aa15.22■□□□□ 0.03
CHD4-211ENST00000544484 ME1P48163 572 aa15.22■□□□□ 0.03
CHD4-211ENST00000544484 KCNH5Q8NCM2 988 aa15.22■□□□□ 0.03
CHD4-211ENST00000544484 CDK5RAP3Q96JB5 506 aa15.22■□□□□ 0.03
CHD4-211ENST00000544484 PTPN23Q9H3S7 1636 aa15.22■□□□□ 0.03
CHD4-211ENST00000544484 RARSP54136 660 aaKnown RBP15.21■□□□□ 0.03
CHD4-211ENST00000544484 ZNF771Q7L3S4 317 aaPredicted RBP15.21■□□□□ 0.03
CHD4-211ENST00000544484 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
CHD4-211ENST00000544484 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
CHD4-211ENST00000544484 BRPF3Q9ULD4 1205 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms