RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
SCG3-202ENST00000542355 AMPHP49418 695 aa14.46□□□□□ -0.1
SCG3-202ENST00000542355 EIF4A2Q14240 407 aaKnown RBP14.46□□□□□ -0.1
SCG3-202ENST00000542355 DUSP27Q5VZP5 1158 aa14.46□□□□□ -0.1
SCG3-202ENST00000542355 KRT28Q7Z3Y7 464 aa14.46□□□□□ -0.1
SCG3-202ENST00000542355 RSPH6AQ9H0K4 717 aa14.46□□□□□ -0.1
SCG3-202ENST00000542355 RCAN3Q9UKA8 241 aa14.46□□□□□ -0.1
SCG3-202ENST00000542355 PRKAR2BP31323 418 aa14.45□□□□□ -0.1
SCG3-202ENST00000542355 LMOD2Q6P5Q4 547 aa14.45□□□□□ -0.1
SCG3-202ENST00000542355 PIK3C2AO00443 1686 aa14.45□□□□□ -0.1
SCG3-202ENST00000542355 DCCP43146 1447 aa14.44□□□□□ -0.1
SCG3-202ENST00000542355 MST1RQ04912 1400 aa14.44□□□□□ -0.1
SCG3-202ENST00000542355 TMPOP42166 694 aaKnown RBP14.44□□□□□ -0.1
SCG3-202ENST00000542355 IQSEC2Q5JU85 1478 aa14.44□□□□□ -0.1
SCG3-202ENST00000542355 NEFMP07197 916 aa14.44□□□□□ -0.1
SCG3-202ENST00000542355 CCDC27Q2M243 656 aa14.44□□□□□ -0.1
SCG3-202ENST00000542355 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
SCG3-202ENST00000542355 E9PSI1 815 aa14.43□□□□□ -0.1
SCG3-202ENST00000542355 PLEKHG5O94827 1062 aa14.43□□□□□ -0.1
SCG3-202ENST00000542355 DDX17Q92841 729 aaKnown RBP14.43□□□□□ -0.1
SCG3-202ENST00000542355 TRMT2AQ8IZ69 625 aaKnown RBP14.43□□□□□ -0.1
SCG3-202ENST00000542355 SBNO1A3KN83 1393 aa14.42□□□□□ -0.1
SCG3-202ENST00000542355 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
SCG3-202ENST00000542355 RIPK4P57078 832 aa14.42□□□□□ -0.1
SCG3-202ENST00000542355 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
SCG3-202ENST00000542355 LRRC7Q96NW7 1537 aa14.42□□□□□ -0.1
SCG3-202ENST00000542355 FLT4P35916 1363 aa14.42□□□□□ -0.1
SCG3-202ENST00000542355 WDR63Q8IWG1 891 aa14.41□□□□□ -0.1
SCG3-202ENST00000542355 RNF123Q5XPI4 1314 aa14.41□□□□□ -0.1
SCG3-202ENST00000542355 SULT6B1Q6IMI4 303 aa14.41□□□□□ -0.1
SCG3-202ENST00000542355 NPM2Q86SE8 214 aaKnown RBP14.41□□□□□ -0.1
SCG3-202ENST00000542355 KCNH5Q8NCM2 988 aa14.4□□□□□ -0.1
SCG3-202ENST00000542355 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
SCG3-202ENST00000542355 HOXC9P31274 260 aa14.4□□□□□ -0.1
SCG3-202ENST00000542355 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
SCG3-202ENST00000542355 GCP02774 474 aa14.39□□□□□ -0.11
SCG3-202ENST00000542355 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
SCG3-202ENST00000542355 PEAK1Q9H792 1746 aa14.38□□□□□ -0.11
SCG3-202ENST00000542355 ZBTB7CA1YPR0 619 aa14.38□□□□□ -0.11
SCG3-202ENST00000542355 SLAIN2Q9P270 581 aa14.38□□□□□ -0.11
SCG3-202ENST00000542355 NPHP3Q7Z494 1330 aa14.38□□□□□ -0.11
SCG3-202ENST00000542355 RRP1P56182 461 aaKnown RBP14.37□□□□□ -0.11
SCG3-202ENST00000542355 NFE2L2Q16236 605 aa14.37□□□□□ -0.11
SCG3-202ENST00000542355 BRINP3Q76B58 766 aa14.37□□□□□ -0.11
SCG3-202ENST00000542355 LTV1Q96GA3 475 aaPredicted RBP14.37□□□□□ -0.11
SCG3-202ENST00000542355 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.37□□□□□ -0.11
SCG3-202ENST00000542355 KIF24Q5T7B8 1368 aa14.37□□□□□ -0.11
SCG3-202ENST00000542355 EYA1Q99502 592 aa14.36□□□□□ -0.11
SCG3-202ENST00000542355 IP6K1Q92551 441 aa14.36□□□□□ -0.11
SCG3-202ENST00000542355 TSHZ2Q9NRE2 1034 aa14.36□□□□□ -0.11
SCG3-202ENST00000542355 KIF1AQ12756 1690 aa14.35□□□□□ -0.11
SCG3-202ENST00000542355 ERICH6BQ5W0A0 696 aa14.35□□□□□ -0.11
SCG3-202ENST00000542355 BBXQ8WY36 941 aaPredicted RBP14.35□□□□□ -0.11
SCG3-202ENST00000542355 MARF1Q9Y4F3 1742 aaKnown RBP14.35□□□□□ -0.11
SCG3-202ENST00000542355 PLIN1O60240 522 aa14.34□□□□□ -0.11
SCG3-202ENST00000542355 MYH16Q9H6N6 1097 aa14.34□□□□□ -0.11
SCG3-202ENST00000542355 USP19O94966 1318 aa14.33□□□□□ -0.11
SCG3-202ENST00000542355 ARHGEF25Q86VW2 580 aa14.33□□□□□ -0.11
SCG3-202ENST00000542355 USP54Q70EL1 1684 aa14.33□□□□□ -0.12
SCG3-202ENST00000542355 XIRP1Q702N8 1843 aaKnown RBP14.33□□□□□ -0.12
SCG3-202ENST00000542355 ARHGEF10O15013 1369 aa14.33□□□□□ -0.12
SCG3-202ENST00000542355 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.12
SCG3-202ENST00000542355 NBR1Q14596 966 aa14.33□□□□□ -0.12
SCG3-202ENST00000542355 RTL1A6NKG5 1358 aa14.32□□□□□ -0.12
SCG3-202ENST00000542355 ZC3H6P61129 1189 aaKnown RBP14.32□□□□□ -0.12
SCG3-202ENST00000542355 TSR2Q969E8 191 aaKnown RBP14.32□□□□□ -0.12
SCG3-202ENST00000542355 NFAT5O94916 1531 aa14.32□□□□□ -0.12
SCG3-202ENST00000542355 THUMPD2Q9BTF0 503 aaKnown RBP14.32□□□□□ -0.12
SCG3-202ENST00000542355 TRPM3Q9HCF6 1732 aaPredicted RBP14.31□□□□□ -0.12
SCG3-202ENST00000542355 IL16Q14005 1332 aa14.31□□□□□ -0.12
SCG3-202ENST00000542355 CABLES1Q8TDN4 633 aa14.31□□□□□ -0.12
SCG3-202ENST00000542355 SPATA31A3Q5VYP0 1347 aa14.31□□□□□ -0.12
SCG3-202ENST00000542355 LMOD3Q0VAK6 560 aa14.3□□□□□ -0.12
SCG3-202ENST00000542355 LAS1LQ9Y4W2 734 aaKnown RBP14.3□□□□□ -0.12
SCG3-202ENST00000542355 FANCIQ9NVI1 1328 aa14.3□□□□□ -0.12
SCG3-202ENST00000542355 FAM83GA6ND36 823 aa14.3□□□□□ -0.12
SCG3-202ENST00000542355 BCAR3O75815 825 aa14.3□□□□□ -0.12
SCG3-202ENST00000542355 PPP4R2Q9NY27 417 aa14.3□□□□□ -0.12
SCG3-202ENST00000542355 KDRP35968 1356 aa14.3□□□□□ -0.12
SCG3-202ENST00000542355 DCTN1Q14203 1278 aa14.29□□□□□ -0.12
SCG3-202ENST00000542355 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
SCG3-202ENST00000542355 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
SCG3-202ENST00000542355 SLIT3O75094 1523 aa14.29□□□□□ -0.12
SCG3-202ENST00000542355 TNS3Q68CZ2 1445 aa14.29□□□□□ -0.12
SCG3-202ENST00000542355 MTHFSDQ2M296 383 aaKnown RBP14.29□□□□□ -0.12
SCG3-202ENST00000542355 NBPF6Q5VWK0 638 aa14.29□□□□□ -0.12
SCG3-202ENST00000542355 NBPF4Q96M43 638 aa14.29□□□□□ -0.12
SCG3-202ENST00000542355 AXIN2Q9Y2T1 843 aa14.29□□□□□ -0.12
SCG3-202ENST00000542355 PXDNQ92626 1479 aa14.28□□□□□ -0.12
SCG3-202ENST00000542355 CALD1Q05682 793 aaKnown RBP14.28□□□□□ -0.12
SCG3-202ENST00000542355 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.12
SCG3-202ENST00000542355 RGPD1P0DJD0 1748 aa14.27□□□□□ -0.12
SCG3-202ENST00000542355 SOS2Q07890 1332 aaPredicted RBP14.27□□□□□ -0.12
SCG3-202ENST00000542355 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.27□□□□□ -0.13
SCG3-202ENST00000542355 LRRC59Q96AG4 307 aaKnown RBP14.27□□□□□ -0.13
SCG3-202ENST00000542355 EXOC6Q8TAG9 804 aa14.26□□□□□ -0.13
SCG3-202ENST00000542355 ANKRD24Q8TF21 1146 aa14.26□□□□□ -0.13
SCG3-202ENST00000542355 ALS2Q96Q42 1657 aa14.26□□□□□ -0.13
SCG3-202ENST00000542355 RARSP54136 660 aaKnown RBP14.26□□□□□ -0.13
SCG3-202ENST00000542355 C20orf194Q5TEA3 1177 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms