RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 TRPM3Q9HCF6 1732 aaPredicted RBP12.52□□□□□ -0.41
PAAF1-209ENST00000540659 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
PAAF1-209ENST00000540659 IL13P35225 146 aa12.52□□□□□ -0.41
PAAF1-209ENST00000540659 XPCQ01831 940 aaPredicted RBP12.52□□□□□ -0.41
PAAF1-209ENST00000540659 SLFN5Q08AF3 891 aa12.52□□□□□ -0.41
PAAF1-209ENST00000540659 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
PAAF1-209ENST00000540659 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
PAAF1-209ENST00000540659 FOXO3O43524 673 aa12.51□□□□□ -0.41
PAAF1-209ENST00000540659 DUSP27Q5VZP5 1158 aa12.51□□□□□ -0.41
PAAF1-209ENST00000540659 WWC1Q8IX03 1113 aa12.51□□□□□ -0.41
PAAF1-209ENST00000540659 NGEFQ8N5V2 710 aa12.51□□□□□ -0.41
PAAF1-209ENST00000540659 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
PAAF1-209ENST00000540659 NEFMP07197 916 aa12.5□□□□□ -0.41
PAAF1-209ENST00000540659 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
PAAF1-209ENST00000540659 RSPH6AQ9H0K4 717 aa12.5□□□□□ -0.41
PAAF1-209ENST00000540659 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
PAAF1-209ENST00000540659 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
PAAF1-209ENST00000540659 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
PAAF1-209ENST00000540659 ALS2Q96Q42 1657 aa12.49□□□□□ -0.41
PAAF1-209ENST00000540659 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
PAAF1-209ENST00000540659 SPATA31A6Q5VVP1 1343 aa12.49□□□□□ -0.41
PAAF1-209ENST00000540659 E9PSI1 815 aa12.49□□□□□ -0.41
PAAF1-209ENST00000540659 FCHSD2O94868 740 aa12.49□□□□□ -0.41
PAAF1-209ENST00000540659 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
PAAF1-209ENST00000540659 AMPHP49418 695 aa12.49□□□□□ -0.41
PAAF1-209ENST00000540659 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
PAAF1-209ENST00000540659 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
PAAF1-209ENST00000540659 LRRC59Q96AG4 307 aaKnown RBP12.49□□□□□ -0.41
PAAF1-209ENST00000540659 TNS3Q68CZ2 1445 aa12.48□□□□□ -0.41
PAAF1-209ENST00000540659 SBNO1A3KN83 1393 aa12.48□□□□□ -0.41
PAAF1-209ENST00000540659 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
PAAF1-209ENST00000540659 ZBTB7CA1YPR0 619 aa12.48□□□□□ -0.41
PAAF1-209ENST00000540659 RIPK4P57078 832 aa12.48□□□□□ -0.41
PAAF1-209ENST00000540659 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
PAAF1-209ENST00000540659 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
PAAF1-209ENST00000540659 FLT4P35916 1363 aa12.47□□□□□ -0.41
PAAF1-209ENST00000540659 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
PAAF1-209ENST00000540659 KRT28Q7Z3Y7 464 aa12.47□□□□□ -0.41
PAAF1-209ENST00000540659 WDR63Q8IWG1 891 aa12.46□□□□□ -0.41
PAAF1-209ENST00000540659 TRMT2AQ8IZ69 625 aaKnown RBP12.46□□□□□ -0.41
PAAF1-209ENST00000540659 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.41
PAAF1-209ENST00000540659 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
PAAF1-209ENST00000540659 SPATA31A3Q5VYP0 1347 aa12.45□□□□□ -0.42
PAAF1-209ENST00000540659 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-209ENST00000540659 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-209ENST00000540659 PLIN1O60240 522 aa12.45□□□□□ -0.42
PAAF1-209ENST00000540659 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
PAAF1-209ENST00000540659 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-209ENST00000540659 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
PAAF1-209ENST00000540659 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
PAAF1-209ENST00000540659 NFAT5O94916 1531 aa12.45□□□□□ -0.42
PAAF1-209ENST00000540659 HOXC9P31274 260 aa12.44□□□□□ -0.42
PAAF1-209ENST00000540659 ERICH6BQ5W0A0 696 aa12.44□□□□□ -0.42
PAAF1-209ENST00000540659 AEBP1Q8IUX7 1158 aa12.44□□□□□ -0.42
PAAF1-209ENST00000540659 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-209ENST00000540659 PPP4R2Q9NY27 417 aa12.44□□□□□ -0.42
PAAF1-209ENST00000540659 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
PAAF1-209ENST00000540659 NFE2L2Q16236 605 aa12.43□□□□□ -0.42
PAAF1-209ENST00000540659 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
PAAF1-209ENST00000540659 MEX3CQ5U5Q3 659 aaKnown RBP12.43□□□□□ -0.42
PAAF1-209ENST00000540659 PHRF1Q9P1Y6 1649 aaKnown RBP12.43□□□□□ -0.42
PAAF1-209ENST00000540659 SLIT3O75094 1523 aa12.42□□□□□ -0.42
PAAF1-209ENST00000540659 TSR2Q969E8 191 aaKnown RBP12.42□□□□□ -0.42
PAAF1-209ENST00000540659 MYH16Q9H6N6 1097 aa12.42□□□□□ -0.42
PAAF1-209ENST00000540659 LAS1LQ9Y4W2 734 aaKnown RBP12.42□□□□□ -0.42
PAAF1-209ENST00000540659 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
PAAF1-209ENST00000540659 ARHGEF10O15013 1369 aa12.42□□□□□ -0.42
PAAF1-209ENST00000540659 B4GALNT3Q6L9W6 998 aa12.41□□□□□ -0.42
PAAF1-209ENST00000540659 KCNH5Q8NCM2 988 aa12.41□□□□□ -0.42
PAAF1-209ENST00000540659 RGS17Q9UGC6 210 aaPredicted RBP12.41□□□□□ -0.42
PAAF1-209ENST00000540659 ILDR2Q71H61 639 aa12.4□□□□□ -0.42
PAAF1-209ENST00000540659 EXOC6Q8TAG9 804 aa12.4□□□□□ -0.42
PAAF1-209ENST00000540659 RTL1A6NKG5 1358 aa12.4□□□□□ -0.42
PAAF1-209ENST00000540659 KIF24Q5T7B8 1368 aa12.4□□□□□ -0.42
PAAF1-209ENST00000540659 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
PAAF1-209ENST00000540659 PLCH1Q4KWH8 1693 aa12.39□□□□□ -0.43
PAAF1-209ENST00000540659 BCAR3O75815 825 aa12.39□□□□□ -0.43
PAAF1-209ENST00000540659 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
PAAF1-209ENST00000540659 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.39□□□□□ -0.43
PAAF1-209ENST00000540659 EYA1Q99502 592 aa12.39□□□□□ -0.43
PAAF1-209ENST00000540659 THUMPD2Q9BTF0 503 aaKnown RBP12.39□□□□□ -0.43
PAAF1-209ENST00000540659 FAM83GA6ND36 823 aa12.38□□□□□ -0.43
PAAF1-209ENST00000540659 GCP02774 474 aa12.38□□□□□ -0.43
PAAF1-209ENST00000540659 PELP1Q8IZL8 1130 aaKnown RBP12.38□□□□□ -0.43
PAAF1-209ENST00000540659 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
PAAF1-209ENST00000540659 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
PAAF1-209ENST00000540659 CRBNQ96SW2 442 aa12.38□□□□□ -0.43
PAAF1-209ENST00000540659 AFF2P51816 1311 aa12.37□□□□□ -0.43
PAAF1-209ENST00000540659 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
PAAF1-209ENST00000540659 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
PAAF1-209ENST00000540659 CANXP27824 592 aaKnown RBP12.37□□□□□ -0.43
PAAF1-209ENST00000540659 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
PAAF1-209ENST00000540659 LMOD3Q0VAK6 560 aa12.37□□□□□ -0.43
PAAF1-209ENST00000540659 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
PAAF1-209ENST00000540659 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
PAAF1-209ENST00000540659 IP6K1Q92551 441 aa12.37□□□□□ -0.43
PAAF1-209ENST00000540659 USP19O94966 1318 aa12.37□□□□□ -0.43
PAAF1-209ENST00000540659 IL16Q14005 1332 aa12.37□□□□□ -0.43
PAAF1-209ENST00000540659 POTEAQ6S8J7 498 aa12.36□□□□□ -0.43
PAAF1-209ENST00000540659 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms